Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27100

Experiment: Tween 20 (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20 (C)
5,935,878	+		AO353_27095	0.39	+0.3
5,935,879	-		AO353_27095	0.39	-0.0
5,935,879	-		AO353_27095	0.39	+2.5
5,935,879	-		AO353_27095	0.39	-0.5
5,935,884	+		AO353_27095	0.40	+0.2
5,935,884	+		AO353_27095	0.40	-0.6
5,935,885	-		AO353_27095	0.40	-0.9
5,935,885	-		AO353_27095	0.40	-2.9
5,935,919	+		AO353_27095	0.44	-1.3
5,935,920	-		AO353_27095	0.44	+0.8
5,936,163	+		AO353_27095	0.77	+0.1
5,936,163	+		AO353_27095	0.77	-0.5
5,936,164	-		AO353_27095	0.77	-0.9
5,936,223	+		AO353_27095	0.85	-0.9
5,936,224	-		AO353_27095	0.85	-0.0
5,936,300	+				+0.7
5,936,300	+				+1.0
5,936,300	+				+0.3
5,936,301	-				+1.0
5,936,301	-				+1.0
5,936,301	-				-0.6
5,936,301	-				+2.2
5,936,383	-				+0.0
5,936,383	-				+0.5
5,936,403	+				+0.6
5,936,403	+				-0.6
5,936,403	+				-0.8
5,936,403	+				+1.7
5,936,403	+				+0.8
5,936,404	-				-1.3
5,936,404	-				+0.6
5,936,404	-				+0.6
5,936,404	-				+0.1
5,936,404	-				+0.2
5,936,404	-				-1.6
5,936,420	-				-1.3
5,936,482	+				+1.5
5,936,548	+				+0.5
5,936,549	-				+2.0
5,936,549	-				+0.2
5,936,552	-				-0.5
5,936,552	-				-0.3
5,936,552	-				+1.4
5,936,592	+				+0.5
5,936,592	+				-1.2
5,936,593	-				+0.5
5,936,612	+				+1.0
5,936,612	+				+0.1
5,936,612	+				-0.0
5,936,612	+				+1.0
5,936,613	-				+0.7
5,936,613	-				-1.2
5,936,613	-				-0.9
5,936,613	-				-0.3
5,936,613	-				+0.6
5,936,613	-				-0.9
5,936,615	+				+0.5
5,936,616	-				+0.5
5,936,616	-				+0.7
5,936,616	-				+1.0
5,936,623	+				-0.2
5,936,711	+				-0.7
5,936,722	-				-0.9
5,936,751	-				-0.7
5,936,753	+				-0.4
5,936,753	+				+0.1
5,936,754	-				+0.4
5,936,754	-				+1.0
5,936,913	+		AO353_27100	0.11	-1.0
5,936,913	+		AO353_27100	0.11	-0.4
5,936,914	-		AO353_27100	0.11	+0.4
5,936,974	+		AO353_27100	0.25	+1.2
5,936,974	+		AO353_27100	0.25	+0.0
5,936,974	+		AO353_27100	0.25	+1.4
5,936,975	-		AO353_27100	0.25	-0.0
5,936,975	-		AO353_27100	0.25	-0.6
5,936,975	-		AO353_27100	0.25	+0.5
5,936,975	-		AO353_27100	0.25	-1.7
5,936,975	-		AO353_27100	0.25	-0.2
5,936,975	-		AO353_27100	0.25	-0.2
5,936,978	+		AO353_27100	0.26	+0.6
5,936,979	-		AO353_27100	0.26	-0.6
5,937,099	+		AO353_27100	0.54	-0.6
5,937,099	+		AO353_27100	0.54	-0.2
5,937,099	+		AO353_27100	0.54	-0.0
5,937,099	+		AO353_27100	0.54	-0.6
5,937,099	+		AO353_27100	0.54	-1.6
5,937,099	+		AO353_27100	0.54	+0.4
5,937,100	-		AO353_27100	0.54	+0.4
5,937,100	-		AO353_27100	0.54	+1.1
5,937,100	-		AO353_27100	0.54	-0.3
5,937,100	-		AO353_27100	0.54	+1.5
5,937,100	-		AO353_27100	0.54	+1.3
5,937,100	-		AO353_27100	0.54	-0.3
5,937,111	+		AO353_27100	0.57	-0.6
5,937,111	+		AO353_27100	0.57	-0.0
5,937,111	+		AO353_27100	0.57	-1.9
5,937,111	+		AO353_27100	0.57	+1.0
5,937,112	-		AO353_27100	0.57	-0.4
5,937,112	-		AO353_27100	0.57	+0.2
5,937,112	-		AO353_27100	0.57	-0.5
5,937,112	-		AO353_27100	0.57	-0.0
5,937,175	+		AO353_27100	0.72	-1.2
5,937,175	+		AO353_27100	0.72	-1.2
5,937,175	+		AO353_27100	0.72	-2.0
5,937,176	-		AO353_27100	0.72	-0.7
5,937,263	+				-0.5
5,937,263	+				-0.0
5,937,263	+				+0.5
5,937,309	-				-0.5
5,937,349	+				+0.1
5,937,349	+				-2.0
5,937,349	+				-0.0
5,937,350	-				-0.5
5,937,350	-				+0.1
5,937,350	-				+1.0
5,937,350	-				-0.4
5,937,394	+				-0.4
5,937,394	+				+0.1
5,937,394	+				+1.1
5,937,395	-				+0.5
5,937,395	-				-0.4
5,937,395	-				+0.1
5,937,395	-				-0.6
5,937,395	-				-0.7
5,937,396	+				-1.0
5,937,396	+				+1.5
5,937,396	+				+1.0
5,937,396	+				+0.5
5,937,396	+				-0.0
5,937,396	+				+1.0
5,937,396	+				-0.0
5,937,396	+				-1.5
5,937,396	+				-0.5
5,937,396	+				-0.5
5,937,396	+				+0.7
5,937,396	+				+0.7
5,937,396	+				+0.0
5,937,396	+				+3.0
5,937,396	+				-2.4
5,937,397	-				+0.1
5,937,397	-				-0.4
5,937,397	-				+0.6
5,937,397	-				-1.4
5,937,397	-				-0.9
5,937,397	-				+0.4
5,937,397	-				-0.4
5,937,397	-				+0.3
5,937,397	-				+0.5
5,937,397	-				+1.0
5,937,397	-				-0.6
5,937,397	-				-1.6
5,937,397	-				-0.4
5,937,397	-				-0.7
5,937,397	-				-0.0
5,937,397	-				-0.6
5,937,397	-				-1.3
5,937,397	-				+0.2
5,937,443	+				+1.0
5,937,443	+				-0.6
5,937,451	-				-0.5
5,937,451	-				-0.6
5,937,529	-				-0.9
5,937,648	-				-1.6
5,937,648	-				-0.8
5,937,732	+		AO353_27105	0.11	+0.5
5,937,748	-		AO353_27105	0.11	-0.5
5,937,839	+		AO353_27105	0.15	+1.7
5,937,839	+		AO353_27105	0.15	+0.1
5,937,840	-		AO353_27105	0.15	-0.7
5,937,840	-		AO353_27105	0.15	-1.3
5,937,840	-		AO353_27105	0.15	+0.5
5,937,886	-		AO353_27105	0.16	-0.6
5,937,886	-		AO353_27105	0.16	-0.5
5,937,915	-		AO353_27105	0.18	-0.3
5,938,090	+		AO353_27105	0.24	-0.5
5,938,091	-		AO353_27105	0.24	+0.7
5,938,091	-		AO353_27105	0.24	-1.0
5,938,091	-		AO353_27105	0.24	-0.6
5,938,091	-		AO353_27105	0.24	-1.0
5,938,091	-		AO353_27105	0.24	-1.0
5,938,130	+		AO353_27105	0.26	-1.0
5,938,130	+		AO353_27105	0.26	+0.5
5,938,130	+		AO353_27105	0.26	-1.0
5,938,174	-		AO353_27105	0.27	+0.1
5,938,226	+		AO353_27105	0.29	-0.0
5,938,226	+		AO353_27105	0.29	+0.5
5,938,227	-				-0.6
5,938,227	-		AO353_27105	0.30	-0.3
5,938,227	-		AO353_27105	0.30	-0.5
5,938,227	-		AO353_27105	0.30	+1.0