Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03310

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03300 and AO353_03305 are separated by 197 nucleotidesAO353_03305 and AO353_03310 are separated by 227 nucleotidesAO353_03310 and AO353_03315 are separated by 380 nucleotides AO353_03300: AO353_03300 - hypothetical protein, at 703,013 to 703,204 _03300 AO353_03305: AO353_03305 - hypothetical protein, at 703,402 to 703,779 _03305 AO353_03310: AO353_03310 - long-chain fatty acid--CoA ligase, at 704,007 to 705,707 _03310 AO353_03315: AO353_03315 - long-chain fatty acid--CoA ligase, at 706,088 to 707,776 _03315 Position (kb) 704 705 706Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 703.022 kb on - strandat 703.049 kb on - strand, within AO353_03300at 703.133 kb on - strand, within AO353_03300at 703.133 kb on - strand, within AO353_03300at 703.180 kb on + strand, within AO353_03300at 703.180 kb on + strand, within AO353_03300at 703.181 kb on - strand, within AO353_03300at 703.181 kb on - strand, within AO353_03300at 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.207 kb on + strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.208 kb on - strandat 703.240 kb on + strandat 703.240 kb on + strandat 703.240 kb on + strandat 703.240 kb on + strandat 703.240 kb on + strandat 703.241 kb on - strandat 703.241 kb on - strandat 703.241 kb on - strandat 703.241 kb on - strandat 703.241 kb on - strandat 703.244 kb on + strandat 703.244 kb on + strandat 703.244 kb on + strandat 703.245 kb on - strandat 703.245 kb on - strandat 703.245 kb on - strandat 703.245 kb on - strandat 703.245 kb on - strandat 703.245 kb on - strandat 703.281 kb on + strandat 703.324 kb on + strandat 703.324 kb on + strandat 703.325 kb on - strandat 703.359 kb on + strandat 703.359 kb on + strandat 703.359 kb on + strandat 703.359 kb on + strandat 703.359 kb on + strandat 703.360 kb on - strandat 703.360 kb on - strandat 703.360 kb on - strandat 703.360 kb on - strandat 703.392 kb on + strandat 703.509 kb on + strand, within AO353_03305at 703.509 kb on + strand, within AO353_03305at 703.509 kb on + strand, within AO353_03305at 703.555 kb on + strand, within AO353_03305at 703.579 kb on + strand, within AO353_03305at 703.579 kb on + strand, within AO353_03305at 703.579 kb on + strand, within AO353_03305at 703.579 kb on + strand, within AO353_03305at 703.579 kb on + strand, within AO353_03305at 703.579 kb on + strand, within AO353_03305at 703.579 kb on + strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.580 kb on - strand, within AO353_03305at 703.720 kb on + strand, within AO353_03305at 703.720 kb on + strand, within AO353_03305at 703.721 kb on - strand, within AO353_03305at 703.721 kb on - strand, within AO353_03305at 703.778 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.836 kb on - strandat 703.969 kb on + strandat 703.969 kb on + strandat 703.970 kb on - strandat 703.970 kb on - strandat 704.009 kb on - strandat 704.131 kb on + strandat 704.286 kb on + strand, within AO353_03310at 704.286 kb on + strand, within AO353_03310at 704.287 kb on - strand, within AO353_03310at 704.287 kb on - strand, within AO353_03310at 704.287 kb on - strand, within AO353_03310at 704.309 kb on - strand, within AO353_03310at 704.365 kb on + strand, within AO353_03310at 704.365 kb on + strand, within AO353_03310at 704.365 kb on + strand, within AO353_03310at 704.366 kb on - strand, within AO353_03310at 704.366 kb on - strand, within AO353_03310at 704.564 kb on + strand, within AO353_03310at 704.577 kb on + strand, within AO353_03310at 704.578 kb on - strand, within AO353_03310at 704.578 kb on - strandat 704.578 kb on - strand, within AO353_03310at 704.763 kb on - strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.917 kb on + strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.918 kb on - strand, within AO353_03310at 704.926 kb on + strand, within AO353_03310at 704.927 kb on - strand, within AO353_03310at 704.927 kb on - strand, within AO353_03310at 704.927 kb on - strand, within AO353_03310at 705.067 kb on + strand, within AO353_03310at 705.067 kb on + strand, within AO353_03310at 705.068 kb on - strand, within AO353_03310at 705.068 kb on - strand, within AO353_03310at 705.173 kb on - strand, within AO353_03310at 705.196 kb on + strand, within AO353_03310at 705.196 kb on + strand, within AO353_03310at 705.196 kb on + strand, within AO353_03310at 705.197 kb on - strand, within AO353_03310at 705.197 kb on - strand, within AO353_03310at 705.197 kb on - strand, within AO353_03310at 705.197 kb on - strand, within AO353_03310at 705.197 kb on - strand, within AO353_03310at 705.197 kb on - strand, within AO353_03310at 705.382 kb on + strand, within AO353_03310at 705.382 kb on + strand, within AO353_03310at 705.382 kb on + strand, within AO353_03310at 705.383 kb on - strand, within AO353_03310at 705.383 kb on - strand, within AO353_03310at 705.468 kb on + strand, within AO353_03310at 705.468 kb on + strand, within AO353_03310at 705.469 kb on - strand, within AO353_03310at 705.469 kb on - strand, within AO353_03310at 705.469 kb on - strand, within AO353_03310at 705.501 kb on - strand, within AO353_03310at 705.514 kb on + strand, within AO353_03310at 705.514 kb on + strand, within AO353_03310at 705.514 kb on + strand, within AO353_03310at 705.514 kb on + strand, within AO353_03310at 705.514 kb on + strand, within AO353_03310at 705.515 kb on - strand, within AO353_03310at 705.515 kb on - strand, within AO353_03310at 705.541 kb on + strandat 705.542 kb on - strandat 705.542 kb on - strandat 705.553 kb on + strandat 705.553 kb on + strandat 705.553 kb on + strandat 705.554 kb on - strandat 705.554 kb on - strandat 705.554 kb on - strandat 705.576 kb on - strandat 705.578 kb on + strandat 705.578 kb on + strandat 705.578 kb on + strandat 705.578 kb on + strandat 705.578 kb on + strandat 705.578 kb on + strandat 705.579 kb on - strandat 705.579 kb on - strandat 705.619 kb on - strandat 705.619 kb on - strandat 705.633 kb on - strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.679 kb on + strandat 705.680 kb on - strandat 705.680 kb on - strandat 705.680 kb on - strandat 705.680 kb on - strandat 705.683 kb on + strandat 705.683 kb on + strandat 705.683 kb on + strandat 705.683 kb on + strandat 705.683 kb on + strandat 705.683 kb on + strandat 705.683 kb on + strandat 705.684 kb on - strandat 705.684 kb on - strandat 705.684 kb on - strandat 705.755 kb on + strandat 705.755 kb on + strandat 705.756 kb on - strandat 705.756 kb on - strandat 705.756 kb on - strandat 705.756 kb on - strandat 705.758 kb on + strandat 705.758 kb on + strandat 705.758 kb on + strandat 705.758 kb on + strandat 705.759 kb on - strandat 705.759 kb on - strandat 705.791 kb on + strandat 705.791 kb on + strandat 705.791 kb on + strandat 705.791 kb on + strandat 705.792 kb on - strandat 705.792 kb on - strandat 705.792 kb on - strandat 705.792 kb on - strandat 705.796 kb on - strandat 705.826 kb on + strandat 705.826 kb on + strandat 705.827 kb on - strandat 705.827 kb on - strandat 705.846 kb on + strandat 705.846 kb on + strandat 705.847 kb on - strandat 705.849 kb on + strandat 705.849 kb on + strandat 705.849 kb on + strandat 705.849 kb on + strandat 705.869 kb on - strandat 705.896 kb on + strandat 705.897 kb on - strandat 705.897 kb on - strandat 705.926 kb on + strandat 705.927 kb on - strandat 706.033 kb on + strandat 706.033 kb on + strandat 706.033 kb on + strandat 706.033 kb on + strandat 706.034 kb on - strandat 706.041 kb on + strandat 706.042 kb on - strandat 706.042 kb on - strandat 706.042 kb on - strandat 706.089 kb on + strandat 706.179 kb on + strandat 706.179 kb on + strandat 706.179 kb on + strandat 706.180 kb on - strandat 706.180 kb on - strandat 706.180 kb on - strandat 706.180 kb on - strandat 706.203 kb on + strandat 706.204 kb on - strandat 706.244 kb on + strandat 706.245 kb on - strandat 706.406 kb on + strand, within AO353_03315at 706.642 kb on - strand, within AO353_03315

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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703,022 - -0.1
703,049 - AO353_03300 0.19 -0.6
703,133 - AO353_03300 0.62 -0.5
703,133 - AO353_03300 0.62 +0.2
703,180 + AO353_03300 0.87 +0.1
703,180 + AO353_03300 0.87 +1.8
703,181 - AO353_03300 0.88 -0.1
703,181 - AO353_03300 0.88 +0.2
703,207 + -1.1
703,207 + +1.2
703,207 + +0.4
703,207 + +0.1
703,207 + -1.1
703,207 + +0.7
703,207 + -0.0
703,207 + +0.2
703,207 + +0.4
703,207 + -0.3
703,208 - +0.2
703,208 - -0.2
703,208 - -1.1
703,208 - -0.2
703,208 - -0.5
703,208 - -0.1
703,208 - +0.0
703,208 - +0.9
703,208 - -0.1
703,240 + -0.5
703,240 + -1.0
703,240 + -1.5
703,240 + +0.1
703,240 + -1.0
703,241 - -3.4
703,241 - +0.1
703,241 - +0.2
703,241 - -0.2
703,241 - +0.4
703,244 + +0.5
703,244 + +0.0
703,244 + -0.7
703,245 - +0.3
703,245 - +1.2
703,245 - +0.1
703,245 - -0.4
703,245 - -1.1
703,245 - +0.8
703,281 + +0.0
703,324 + -0.3
703,324 + -0.9
703,325 - -1.1
703,359 + -0.5
703,359 + +0.0
703,359 + +0.4
703,359 + -1.1
703,359 + -1.6
703,360 - -0.3
703,360 - -1.1
703,360 - +0.7
703,360 - -0.4
703,392 + -1.5
703,509 + AO353_03305 0.28 -0.5
703,509 + AO353_03305 0.28 -0.5
703,509 + AO353_03305 0.28 -0.9
703,555 + AO353_03305 0.40 -1.9
703,579 + AO353_03305 0.47 +0.3
703,579 + AO353_03305 0.47 +0.4
703,579 + AO353_03305 0.47 +0.4
703,579 + AO353_03305 0.47 +0.5
703,579 + AO353_03305 0.47 +0.1
703,579 + AO353_03305 0.47 -0.5
703,579 + AO353_03305 0.47 +0.4
703,580 - AO353_03305 0.47 -0.8
703,580 - AO353_03305 0.47 -1.1
703,580 - AO353_03305 0.47 +1.1
703,580 - AO353_03305 0.47 +2.5
703,580 - AO353_03305 0.47 -0.4
703,580 - AO353_03305 0.47 +1.2
703,580 - AO353_03305 0.47 +0.5
703,580 - AO353_03305 0.47 -0.8
703,580 - AO353_03305 0.47 -1.1
703,580 - AO353_03305 0.47 +0.4
703,580 - AO353_03305 0.47 +0.2
703,720 + AO353_03305 0.84 -0.5
703,720 + AO353_03305 0.84 +1.2
703,721 - AO353_03305 0.84 +0.3
703,721 - AO353_03305 0.84 -0.1
703,778 - +0.9
703,836 - +1.8
703,836 - -1.4
703,836 - -0.5
703,836 - -0.7
703,836 - +1.8
703,836 - +0.0
703,836 - +1.0
703,836 - -0.0
703,836 - -2.0
703,836 - +0.9
703,969 + +1.1
703,969 + -0.8
703,970 - +0.0
703,970 - -0.8
704,009 - -0.1
704,131 + -2.6
704,286 + AO353_03310 0.16 -1.5
704,286 + AO353_03310 0.16 +0.5
704,287 - AO353_03310 0.16 -0.7
704,287 - AO353_03310 0.16 -1.1
704,287 - AO353_03310 0.16 -1.1
704,309 - AO353_03310 0.18 -1.7
704,365 + AO353_03310 0.21 -1.4
704,365 + AO353_03310 0.21 -0.5
704,365 + AO353_03310 0.21 -2.7
704,366 - AO353_03310 0.21 -0.8
704,366 - AO353_03310 0.21 +0.8
704,564 + AO353_03310 0.33 -0.2
704,577 + AO353_03310 0.34 -1.4
704,578 - AO353_03310 0.34 -0.5
704,578 - +0.9
704,578 - AO353_03310 0.34 -0.8
704,763 - AO353_03310 0.44 +0.9
704,917 + AO353_03310 0.53 -1.3
704,917 + AO353_03310 0.53 -1.3
704,917 + AO353_03310 0.53 -2.0
704,917 + AO353_03310 0.53 -1.3
704,917 + AO353_03310 0.53 -1.4
704,917 + AO353_03310 0.53 -1.8
704,917 + AO353_03310 0.53 -1.3
704,917 + AO353_03310 0.53 +0.5
704,917 + AO353_03310 0.53 -1.3
704,917 + AO353_03310 0.53 -0.5
704,917 + AO353_03310 0.53 +0.9
704,917 + AO353_03310 0.53 -0.6
704,917 + AO353_03310 0.53 -1.1
704,917 + AO353_03310 0.53 -0.4
704,917 + AO353_03310 0.53 -0.2
704,917 + AO353_03310 0.53 -0.8
704,917 + AO353_03310 0.53 +0.1
704,918 - AO353_03310 0.54 +0.2
704,918 - AO353_03310 0.54 -0.1
704,918 - AO353_03310 0.54 -1.7
704,918 - AO353_03310 0.54 +1.1
704,918 - AO353_03310 0.54 -2.0
704,918 - AO353_03310 0.54 +0.5
704,918 - AO353_03310 0.54 +0.0
704,918 - AO353_03310 0.54 -0.1
704,918 - AO353_03310 0.54 -1.7
704,918 - AO353_03310 0.54 +0.5
704,918 - AO353_03310 0.54 -0.3
704,918 - AO353_03310 0.54 +0.6
704,918 - AO353_03310 0.54 -0.5
704,926 + AO353_03310 0.54 +0.9
704,927 - AO353_03310 0.54 -0.4
704,927 - AO353_03310 0.54 -0.1
704,927 - AO353_03310 0.54 -0.6
705,067 + AO353_03310 0.62 -0.4
705,067 + AO353_03310 0.62 -1.3
705,068 - AO353_03310 0.62 -0.6
705,068 - AO353_03310 0.62 -2.7
705,173 - AO353_03310 0.69 -1.5
705,196 + AO353_03310 0.70 -0.8
705,196 + AO353_03310 0.70 +0.5
705,196 + AO353_03310 0.70 -0.5
705,197 - AO353_03310 0.70 +0.4
705,197 - AO353_03310 0.70 +1.5
705,197 - AO353_03310 0.70 -0.8
705,197 - AO353_03310 0.70 -0.9
705,197 - AO353_03310 0.70 -0.8
705,197 - AO353_03310 0.70 -2.1
705,382 + AO353_03310 0.81 -0.9
705,382 + AO353_03310 0.81 -0.6
705,382 + AO353_03310 0.81 -3.0
705,383 - AO353_03310 0.81 +0.6
705,383 - AO353_03310 0.81 -1.3
705,468 + AO353_03310 0.86 -2.3
705,468 + AO353_03310 0.86 +0.2
705,469 - AO353_03310 0.86 -0.1
705,469 - AO353_03310 0.86 -3.7
705,469 - AO353_03310 0.86 -2.3
705,501 - AO353_03310 0.88 -1.4
705,514 + AO353_03310 0.89 +1.5
705,514 + AO353_03310 0.89 -0.8
705,514 + AO353_03310 0.89 -1.1
705,514 + AO353_03310 0.89 -2.1
705,514 + AO353_03310 0.89 -2.3
705,515 - AO353_03310 0.89 -0.8
705,515 - AO353_03310 0.89 -1.2
705,541 + -0.5
705,542 - -1.0
705,542 - -1.5
705,553 + -2.5
705,553 + -1.8
705,553 + -1.3
705,554 - -1.5
705,554 - -0.3
705,554 - -0.2
705,576 - +0.1
705,578 + +0.3
705,578 + +0.6
705,578 + -0.0
705,578 + -0.1
705,578 + +0.3
705,578 + -1.0
705,579 - -0.3
705,579 - -2.1
705,619 - -0.2
705,619 - -1.8
705,633 - +0.3
705,679 + -0.4
705,679 + -1.1
705,679 + -0.5
705,679 + +0.5
705,679 + -1.2
705,679 + -1.5
705,679 + +1.5
705,679 + -0.7
705,679 + +1.5
705,680 - -1.5
705,680 - -0.3
705,680 - +0.4
705,680 - -1.8
705,683 + -1.3
705,683 + -1.5
705,683 + -0.3
705,683 + +0.8
705,683 + -1.1
705,683 + -0.5
705,683 + -0.0
705,684 - -0.1
705,684 - -1.3
705,684 - -2.5
705,755 + -1.7
705,755 + +0.2
705,756 - -1.7
705,756 - +0.3
705,756 - -0.7
705,756 - +0.2
705,758 + +0.6
705,758 + -0.8
705,758 + +1.1
705,758 + -0.0
705,759 - -0.2
705,759 - -1.5
705,791 + -2.7
705,791 + -1.4
705,791 + -0.4
705,791 + -0.4
705,792 - +0.1
705,792 - -0.2
705,792 - -0.7
705,792 - +1.5
705,796 - +1.5
705,826 + -1.3
705,826 + -2.0
705,827 - +1.5
705,827 - -2.0
705,846 + -0.2
705,846 + +0.5
705,847 - +0.2
705,849 + +0.9
705,849 + -1.6
705,849 + -1.3
705,849 + -1.3
705,869 - -1.2
705,896 + +0.2
705,897 - +0.4
705,897 - -0.2
705,926 + -0.1
705,927 - +0.2
706,033 + -0.2
706,033 + -1.1
706,033 + -0.1
706,033 + +1.2
706,034 - +0.2
706,041 + -0.1
706,042 - +1.2
706,042 - -0.7
706,042 - -0.4
706,089 + -0.5
706,179 + -0.1
706,179 + -0.0
706,179 + -0.3
706,180 - +0.8
706,180 - -1.5
706,180 - +0.1
706,180 - +0.3
706,203 + -0.2
706,204 - -0.1
706,244 + +0.2
706,245 - +0.5
706,406 + AO353_03315 0.19 +0.2
706,642 - AO353_03315 0.33 +2.1

Or see this region's nucleotide sequence