Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03300 and AO353_03305 are separated by 197 nucleotides AO353_03305 and AO353_03310 are separated by 227 nucleotides AO353_03310 and AO353_03315 are separated by 380 nucleotides
AO353_03300: AO353_03300 - hypothetical protein, at 703,013 to 703,204
_03300
AO353_03305: AO353_03305 - hypothetical protein, at 703,402 to 703,779
_03305
AO353_03310: AO353_03310 - long-chain fatty acid--CoA ligase, at 704,007 to 705,707
_03310
AO353_03315: AO353_03315 - long-chain fatty acid--CoA ligase, at 706,088 to 707,776
_03315
Position (kb) 704
705
706 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 703.022 kb on - strand at 703.049 kb on - strand, within AO353_03300 at 703.133 kb on - strand, within AO353_03300 at 703.133 kb on - strand, within AO353_03300 at 703.180 kb on + strand, within AO353_03300 at 703.180 kb on + strand, within AO353_03300 at 703.181 kb on - strand, within AO353_03300 at 703.181 kb on - strand, within AO353_03300 at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.207 kb on + strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.208 kb on - strand at 703.240 kb on + strand at 703.240 kb on + strand at 703.240 kb on + strand at 703.240 kb on + strand at 703.240 kb on + strand at 703.241 kb on - strand at 703.241 kb on - strand at 703.241 kb on - strand at 703.241 kb on - strand at 703.241 kb on - strand at 703.244 kb on + strand at 703.244 kb on + strand at 703.244 kb on + strand at 703.245 kb on - strand at 703.245 kb on - strand at 703.245 kb on - strand at 703.245 kb on - strand at 703.245 kb on - strand at 703.245 kb on - strand at 703.281 kb on + strand at 703.324 kb on + strand at 703.324 kb on + strand at 703.325 kb on - strand at 703.359 kb on + strand at 703.359 kb on + strand at 703.359 kb on + strand at 703.359 kb on + strand at 703.359 kb on + strand at 703.360 kb on - strand at 703.360 kb on - strand at 703.360 kb on - strand at 703.360 kb on - strand at 703.392 kb on + strand at 703.509 kb on + strand, within AO353_03305 at 703.509 kb on + strand, within AO353_03305 at 703.509 kb on + strand, within AO353_03305 at 703.555 kb on + strand, within AO353_03305 at 703.579 kb on + strand, within AO353_03305 at 703.579 kb on + strand, within AO353_03305 at 703.579 kb on + strand, within AO353_03305 at 703.579 kb on + strand, within AO353_03305 at 703.579 kb on + strand, within AO353_03305 at 703.579 kb on + strand, within AO353_03305 at 703.579 kb on + strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.580 kb on - strand, within AO353_03305 at 703.720 kb on + strand, within AO353_03305 at 703.720 kb on + strand, within AO353_03305 at 703.721 kb on - strand, within AO353_03305 at 703.721 kb on - strand, within AO353_03305 at 703.778 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.836 kb on - strand at 703.969 kb on + strand at 703.969 kb on + strand at 703.970 kb on - strand at 703.970 kb on - strand at 704.009 kb on - strand at 704.131 kb on + strand at 704.286 kb on + strand, within AO353_03310 at 704.286 kb on + strand, within AO353_03310 at 704.287 kb on - strand, within AO353_03310 at 704.287 kb on - strand, within AO353_03310 at 704.287 kb on - strand, within AO353_03310 at 704.309 kb on - strand, within AO353_03310 at 704.365 kb on + strand, within AO353_03310 at 704.365 kb on + strand, within AO353_03310 at 704.365 kb on + strand, within AO353_03310 at 704.366 kb on - strand, within AO353_03310 at 704.366 kb on - strand, within AO353_03310 at 704.564 kb on + strand, within AO353_03310 at 704.577 kb on + strand, within AO353_03310 at 704.578 kb on - strand, within AO353_03310 at 704.578 kb on - strand at 704.578 kb on - strand, within AO353_03310 at 704.763 kb on - strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.917 kb on + strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.918 kb on - strand, within AO353_03310 at 704.926 kb on + strand, within AO353_03310 at 704.927 kb on - strand, within AO353_03310 at 704.927 kb on - strand, within AO353_03310 at 704.927 kb on - strand, within AO353_03310 at 705.067 kb on + strand, within AO353_03310 at 705.067 kb on + strand, within AO353_03310 at 705.068 kb on - strand, within AO353_03310 at 705.068 kb on - strand, within AO353_03310 at 705.173 kb on - strand, within AO353_03310 at 705.196 kb on + strand, within AO353_03310 at 705.196 kb on + strand, within AO353_03310 at 705.196 kb on + strand, within AO353_03310 at 705.197 kb on - strand, within AO353_03310 at 705.197 kb on - strand, within AO353_03310 at 705.197 kb on - strand, within AO353_03310 at 705.197 kb on - strand, within AO353_03310 at 705.197 kb on - strand, within AO353_03310 at 705.197 kb on - strand, within AO353_03310 at 705.382 kb on + strand, within AO353_03310 at 705.382 kb on + strand, within AO353_03310 at 705.382 kb on + strand, within AO353_03310 at 705.383 kb on - strand, within AO353_03310 at 705.383 kb on - strand, within AO353_03310 at 705.468 kb on + strand, within AO353_03310 at 705.468 kb on + strand, within AO353_03310 at 705.469 kb on - strand, within AO353_03310 at 705.469 kb on - strand, within AO353_03310 at 705.469 kb on - strand, within AO353_03310 at 705.501 kb on - strand, within AO353_03310 at 705.514 kb on + strand, within AO353_03310 at 705.514 kb on + strand, within AO353_03310 at 705.514 kb on + strand, within AO353_03310 at 705.514 kb on + strand, within AO353_03310 at 705.514 kb on + strand, within AO353_03310 at 705.515 kb on - strand, within AO353_03310 at 705.515 kb on - strand, within AO353_03310 at 705.541 kb on + strand at 705.542 kb on - strand at 705.542 kb on - strand at 705.553 kb on + strand at 705.553 kb on + strand at 705.553 kb on + strand at 705.554 kb on - strand at 705.554 kb on - strand at 705.554 kb on - strand at 705.576 kb on - strand at 705.578 kb on + strand at 705.578 kb on + strand at 705.578 kb on + strand at 705.578 kb on + strand at 705.578 kb on + strand at 705.578 kb on + strand at 705.579 kb on - strand at 705.579 kb on - strand at 705.619 kb on - strand at 705.619 kb on - strand at 705.633 kb on - strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.679 kb on + strand at 705.680 kb on - strand at 705.680 kb on - strand at 705.680 kb on - strand at 705.680 kb on - strand at 705.683 kb on + strand at 705.683 kb on + strand at 705.683 kb on + strand at 705.683 kb on + strand at 705.683 kb on + strand at 705.683 kb on + strand at 705.683 kb on + strand at 705.684 kb on - strand at 705.684 kb on - strand at 705.684 kb on - strand at 705.755 kb on + strand at 705.755 kb on + strand at 705.756 kb on - strand at 705.756 kb on - strand at 705.756 kb on - strand at 705.756 kb on - strand at 705.758 kb on + strand at 705.758 kb on + strand at 705.758 kb on + strand at 705.758 kb on + strand at 705.759 kb on - strand at 705.759 kb on - strand at 705.791 kb on + strand at 705.791 kb on + strand at 705.791 kb on + strand at 705.791 kb on + strand at 705.792 kb on - strand at 705.792 kb on - strand at 705.792 kb on - strand at 705.792 kb on - strand at 705.796 kb on - strand at 705.826 kb on + strand at 705.826 kb on + strand at 705.827 kb on - strand at 705.827 kb on - strand at 705.846 kb on + strand at 705.846 kb on + strand at 705.847 kb on - strand at 705.849 kb on + strand at 705.849 kb on + strand at 705.849 kb on + strand at 705.849 kb on + strand at 705.869 kb on - strand at 705.896 kb on + strand at 705.897 kb on - strand at 705.897 kb on - strand at 705.926 kb on + strand at 705.927 kb on - strand at 706.033 kb on + strand at 706.033 kb on + strand at 706.033 kb on + strand at 706.033 kb on + strand at 706.034 kb on - strand at 706.041 kb on + strand at 706.042 kb on - strand at 706.042 kb on - strand at 706.042 kb on - strand at 706.089 kb on + strand at 706.179 kb on + strand at 706.179 kb on + strand at 706.179 kb on + strand at 706.180 kb on - strand at 706.180 kb on - strand at 706.180 kb on - strand at 706.180 kb on - strand at 706.203 kb on + strand at 706.204 kb on - strand at 706.244 kb on + strand at 706.245 kb on - strand at 706.406 kb on + strand, within AO353_03315 at 706.642 kb on - strand, within AO353_03315
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 703,022 - -0.1 703,049 - AO353_03300 0.19 -0.6 703,133 - AO353_03300 0.62 -0.5 703,133 - AO353_03300 0.62 +0.2 703,180 + AO353_03300 0.87 +0.1 703,180 + AO353_03300 0.87 +1.8 703,181 - AO353_03300 0.88 -0.1 703,181 - AO353_03300 0.88 +0.2 703,207 + -1.1 703,207 + +1.2 703,207 + +0.4 703,207 + +0.1 703,207 + -1.1 703,207 + +0.7 703,207 + -0.0 703,207 + +0.2 703,207 + +0.4 703,207 + -0.3 703,208 - +0.2 703,208 - -0.2 703,208 - -1.1 703,208 - -0.2 703,208 - -0.5 703,208 - -0.1 703,208 - +0.0 703,208 - +0.9 703,208 - -0.1 703,240 + -0.5 703,240 + -1.0 703,240 + -1.5 703,240 + +0.1 703,240 + -1.0 703,241 - -3.4 703,241 - +0.1 703,241 - +0.2 703,241 - -0.2 703,241 - +0.4 703,244 + +0.5 703,244 + +0.0 703,244 + -0.7 703,245 - +0.3 703,245 - +1.2 703,245 - +0.1 703,245 - -0.4 703,245 - -1.1 703,245 - +0.8 703,281 + +0.0 703,324 + -0.3 703,324 + -0.9 703,325 - -1.1 703,359 + -0.5 703,359 + +0.0 703,359 + +0.4 703,359 + -1.1 703,359 + -1.6 703,360 - -0.3 703,360 - -1.1 703,360 - +0.7 703,360 - -0.4 703,392 + -1.5 703,509 + AO353_03305 0.28 -0.5 703,509 + AO353_03305 0.28 -0.5 703,509 + AO353_03305 0.28 -0.9 703,555 + AO353_03305 0.40 -1.9 703,579 + AO353_03305 0.47 +0.3 703,579 + AO353_03305 0.47 +0.4 703,579 + AO353_03305 0.47 +0.4 703,579 + AO353_03305 0.47 +0.5 703,579 + AO353_03305 0.47 +0.1 703,579 + AO353_03305 0.47 -0.5 703,579 + AO353_03305 0.47 +0.4 703,580 - AO353_03305 0.47 -0.8 703,580 - AO353_03305 0.47 -1.1 703,580 - AO353_03305 0.47 +1.1 703,580 - AO353_03305 0.47 +2.5 703,580 - AO353_03305 0.47 -0.4 703,580 - AO353_03305 0.47 +1.2 703,580 - AO353_03305 0.47 +0.5 703,580 - AO353_03305 0.47 -0.8 703,580 - AO353_03305 0.47 -1.1 703,580 - AO353_03305 0.47 +0.4 703,580 - AO353_03305 0.47 +0.2 703,720 + AO353_03305 0.84 -0.5 703,720 + AO353_03305 0.84 +1.2 703,721 - AO353_03305 0.84 +0.3 703,721 - AO353_03305 0.84 -0.1 703,778 - +0.9 703,836 - +1.8 703,836 - -1.4 703,836 - -0.5 703,836 - -0.7 703,836 - +1.8 703,836 - +0.0 703,836 - +1.0 703,836 - -0.0 703,836 - -2.0 703,836 - +0.9 703,969 + +1.1 703,969 + -0.8 703,970 - +0.0 703,970 - -0.8 704,009 - -0.1 704,131 + -2.6 704,286 + AO353_03310 0.16 -1.5 704,286 + AO353_03310 0.16 +0.5 704,287 - AO353_03310 0.16 -0.7 704,287 - AO353_03310 0.16 -1.1 704,287 - AO353_03310 0.16 -1.1 704,309 - AO353_03310 0.18 -1.7 704,365 + AO353_03310 0.21 -1.4 704,365 + AO353_03310 0.21 -0.5 704,365 + AO353_03310 0.21 -2.7 704,366 - AO353_03310 0.21 -0.8 704,366 - AO353_03310 0.21 +0.8 704,564 + AO353_03310 0.33 -0.2 704,577 + AO353_03310 0.34 -1.4 704,578 - AO353_03310 0.34 -0.5 704,578 - +0.9 704,578 - AO353_03310 0.34 -0.8 704,763 - AO353_03310 0.44 +0.9 704,917 + AO353_03310 0.53 -1.3 704,917 + AO353_03310 0.53 -1.3 704,917 + AO353_03310 0.53 -2.0 704,917 + AO353_03310 0.53 -1.3 704,917 + AO353_03310 0.53 -1.4 704,917 + AO353_03310 0.53 -1.8 704,917 + AO353_03310 0.53 -1.3 704,917 + AO353_03310 0.53 +0.5 704,917 + AO353_03310 0.53 -1.3 704,917 + AO353_03310 0.53 -0.5 704,917 + AO353_03310 0.53 +0.9 704,917 + AO353_03310 0.53 -0.6 704,917 + AO353_03310 0.53 -1.1 704,917 + AO353_03310 0.53 -0.4 704,917 + AO353_03310 0.53 -0.2 704,917 + AO353_03310 0.53 -0.8 704,917 + AO353_03310 0.53 +0.1 704,918 - AO353_03310 0.54 +0.2 704,918 - AO353_03310 0.54 -0.1 704,918 - AO353_03310 0.54 -1.7 704,918 - AO353_03310 0.54 +1.1 704,918 - AO353_03310 0.54 -2.0 704,918 - AO353_03310 0.54 +0.5 704,918 - AO353_03310 0.54 +0.0 704,918 - AO353_03310 0.54 -0.1 704,918 - AO353_03310 0.54 -1.7 704,918 - AO353_03310 0.54 +0.5 704,918 - AO353_03310 0.54 -0.3 704,918 - AO353_03310 0.54 +0.6 704,918 - AO353_03310 0.54 -0.5 704,926 + AO353_03310 0.54 +0.9 704,927 - AO353_03310 0.54 -0.4 704,927 - AO353_03310 0.54 -0.1 704,927 - AO353_03310 0.54 -0.6 705,067 + AO353_03310 0.62 -0.4 705,067 + AO353_03310 0.62 -1.3 705,068 - AO353_03310 0.62 -0.6 705,068 - AO353_03310 0.62 -2.7 705,173 - AO353_03310 0.69 -1.5 705,196 + AO353_03310 0.70 -0.8 705,196 + AO353_03310 0.70 +0.5 705,196 + AO353_03310 0.70 -0.5 705,197 - AO353_03310 0.70 +0.4 705,197 - AO353_03310 0.70 +1.5 705,197 - AO353_03310 0.70 -0.8 705,197 - AO353_03310 0.70 -0.9 705,197 - AO353_03310 0.70 -0.8 705,197 - AO353_03310 0.70 -2.1 705,382 + AO353_03310 0.81 -0.9 705,382 + AO353_03310 0.81 -0.6 705,382 + AO353_03310 0.81 -3.0 705,383 - AO353_03310 0.81 +0.6 705,383 - AO353_03310 0.81 -1.3 705,468 + AO353_03310 0.86 -2.3 705,468 + AO353_03310 0.86 +0.2 705,469 - AO353_03310 0.86 -0.1 705,469 - AO353_03310 0.86 -3.7 705,469 - AO353_03310 0.86 -2.3 705,501 - AO353_03310 0.88 -1.4 705,514 + AO353_03310 0.89 +1.5 705,514 + AO353_03310 0.89 -0.8 705,514 + AO353_03310 0.89 -1.1 705,514 + AO353_03310 0.89 -2.1 705,514 + AO353_03310 0.89 -2.3 705,515 - AO353_03310 0.89 -0.8 705,515 - AO353_03310 0.89 -1.2 705,541 + -0.5 705,542 - -1.0 705,542 - -1.5 705,553 + -2.5 705,553 + -1.8 705,553 + -1.3 705,554 - -1.5 705,554 - -0.3 705,554 - -0.2 705,576 - +0.1 705,578 + +0.3 705,578 + +0.6 705,578 + -0.0 705,578 + -0.1 705,578 + +0.3 705,578 + -1.0 705,579 - -0.3 705,579 - -2.1 705,619 - -0.2 705,619 - -1.8 705,633 - +0.3 705,679 + -0.4 705,679 + -1.1 705,679 + -0.5 705,679 + +0.5 705,679 + -1.2 705,679 + -1.5 705,679 + +1.5 705,679 + -0.7 705,679 + +1.5 705,680 - -1.5 705,680 - -0.3 705,680 - +0.4 705,680 - -1.8 705,683 + -1.3 705,683 + -1.5 705,683 + -0.3 705,683 + +0.8 705,683 + -1.1 705,683 + -0.5 705,683 + -0.0 705,684 - -0.1 705,684 - -1.3 705,684 - -2.5 705,755 + -1.7 705,755 + +0.2 705,756 - -1.7 705,756 - +0.3 705,756 - -0.7 705,756 - +0.2 705,758 + +0.6 705,758 + -0.8 705,758 + +1.1 705,758 + -0.0 705,759 - -0.2 705,759 - -1.5 705,791 + -2.7 705,791 + -1.4 705,791 + -0.4 705,791 + -0.4 705,792 - +0.1 705,792 - -0.2 705,792 - -0.7 705,792 - +1.5 705,796 - +1.5 705,826 + -1.3 705,826 + -2.0 705,827 - +1.5 705,827 - -2.0 705,846 + -0.2 705,846 + +0.5 705,847 - +0.2 705,849 + +0.9 705,849 + -1.6 705,849 + -1.3 705,849 + -1.3 705,869 - -1.2 705,896 + +0.2 705,897 - +0.4 705,897 - -0.2 705,926 + -0.1 705,927 - +0.2 706,033 + -0.2 706,033 + -1.1 706,033 + -0.1 706,033 + +1.2 706,034 - +0.2 706,041 + -0.1 706,042 - +1.2 706,042 - -0.7 706,042 - -0.4 706,089 + -0.5 706,179 + -0.1 706,179 + -0.0 706,179 + -0.3 706,180 - +0.8 706,180 - -1.5 706,180 - +0.1 706,180 - +0.3 706,203 + -0.2 706,204 - -0.1 706,244 + +0.2 706,245 - +0.5 706,406 + AO353_03315 0.19 +0.2 706,642 - AO353_03315 0.33 +2.1
Or see this region's nucleotide sequence