Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3262 and Shewana3_3263 are separated by 358 nucleotides Shewana3_3263 and Shewana3_3264 are separated by 136 nucleotides
Shewana3_3262: Shewana3_3262 - RND family efflux transporter MFP subunit (RefSeq), at 3,903,663 to 3,904,925
_3262
Shewana3_3263: Shewana3_3263 - dihydroorotase (RefSeq), at 3,905,284 to 3,906,327
_3263
Shewana3_3264: Shewana3_3264 - hypothetical protein (RefSeq), at 3,906,464 to 3,907,510
_3264
Position (kb)
3905
3906
3907 Strain fitness (log2 ratio)
-2
-1
0
1 at 3904.374 kb on - strand, within Shewana3_3262 at 3904.408 kb on - strand, within Shewana3_3262 at 3904.476 kb on + strand, within Shewana3_3262 at 3904.531 kb on - strand, within Shewana3_3262 at 3904.601 kb on - strand, within Shewana3_3262 at 3904.721 kb on + strand, within Shewana3_3262 at 3904.822 kb on + strand at 3904.823 kb on - strand at 3904.837 kb on - strand at 3904.902 kb on - strand at 3905.184 kb on - strand at 3905.300 kb on - strand at 3905.309 kb on + strand at 3905.574 kb on - strand, within Shewana3_3263 at 3905.593 kb on - strand, within Shewana3_3263 at 3905.600 kb on - strand, within Shewana3_3263 at 3905.649 kb on + strand, within Shewana3_3263 at 3905.657 kb on - strand, within Shewana3_3263 at 3905.701 kb on - strand, within Shewana3_3263 at 3905.917 kb on - strand, within Shewana3_3263 at 3905.996 kb on - strand, within Shewana3_3263 at 3906.013 kb on - strand, within Shewana3_3263 at 3906.136 kb on - strand, within Shewana3_3263 at 3906.138 kb on + strand, within Shewana3_3263 at 3906.550 kb on + strand at 3906.577 kb on + strand, within Shewana3_3264 at 3906.588 kb on + strand, within Shewana3_3264 at 3906.596 kb on - strand, within Shewana3_3264 at 3906.596 kb on - strand, within Shewana3_3264 at 3906.691 kb on + strand, within Shewana3_3264 at 3907.030 kb on - strand, within Shewana3_3264 at 3907.123 kb on - strand, within Shewana3_3264 at 3907.125 kb on + strand, within Shewana3_3264
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 3,904,374 - Shewana3_3262 0.56 -0.1 3,904,408 - Shewana3_3262 0.59 +0.2 3,904,476 + Shewana3_3262 0.64 +0.4 3,904,531 - Shewana3_3262 0.69 -0.2 3,904,601 - Shewana3_3262 0.74 -0.1 3,904,721 + Shewana3_3262 0.84 -0.2 3,904,822 + +0.0 3,904,823 - +0.3 3,904,837 - -0.3 3,904,902 - +0.3 3,905,184 - +0.1 3,905,300 - -0.2 3,905,309 + -1.9 3,905,574 - Shewana3_3263 0.28 -0.7 3,905,593 - Shewana3_3263 0.30 -0.9 3,905,600 - Shewana3_3263 0.30 -0.1 3,905,649 + Shewana3_3263 0.35 -1.3 3,905,657 - Shewana3_3263 0.36 -0.4 3,905,701 - Shewana3_3263 0.40 -1.4 3,905,917 - Shewana3_3263 0.61 -0.7 3,905,996 - Shewana3_3263 0.68 -2.1 3,906,013 - Shewana3_3263 0.70 -0.7 3,906,136 - Shewana3_3263 0.82 +1.0 3,906,138 + Shewana3_3263 0.82 -0.4 3,906,550 + -0.7 3,906,577 + Shewana3_3264 0.11 +0.4 3,906,588 + Shewana3_3264 0.12 -0.5 3,906,596 - Shewana3_3264 0.13 -0.3 3,906,596 - Shewana3_3264 0.13 +1.2 3,906,691 + Shewana3_3264 0.22 +0.1 3,907,030 - Shewana3_3264 0.54 -0.2 3,907,123 - Shewana3_3264 0.63 -0.1 3,907,125 + Shewana3_3264 0.63 +0.0
Or see this region's nucleotide sequence