Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_2759 and Shewana3_2760 are separated by 129 nucleotides Shewana3_2760 and Shewana3_2761 are separated by 427 nucleotides
Shewana3_2759: Shewana3_2759 - hypothetical protein (RefSeq), at 3,295,045 to 3,295,941
_2759
Shewana3_2760: Shewana3_2760 - ABC transporter related (RefSeq), at 3,296,071 to 3,297,711
_2760
Shewana3_2761: Shewana3_2761 - copper-translocating P-type ATPase (RefSeq), at 3,298,139 to 3,300,400
_2761
Position (kb)
3296
3297
3298 Strain fitness (log2 ratio)
-2
-1
0
1 at 3295.402 kb on - strand, within Shewana3_2759 at 3295.485 kb on - strand, within Shewana3_2759 at 3295.553 kb on + strand, within Shewana3_2759 at 3295.589 kb on + strand, within Shewana3_2759 at 3295.789 kb on + strand, within Shewana3_2759 at 3295.858 kb on - strand at 3295.889 kb on + strand at 3295.892 kb on - strand at 3296.005 kb on - strand at 3296.005 kb on - strand at 3296.923 kb on + strand, within Shewana3_2760 at 3296.976 kb on + strand, within Shewana3_2760 at 3297.390 kb on + strand, within Shewana3_2760 at 3297.413 kb on - strand, within Shewana3_2760 at 3297.680 kb on + strand at 3297.716 kb on + strand at 3297.957 kb on - strand at 3297.983 kb on - strand at 3298.003 kb on + strand at 3298.031 kb on - strand at 3298.153 kb on + strand at 3298.241 kb on - strand at 3298.441 kb on + strand, within Shewana3_2761 at 3298.480 kb on + strand, within Shewana3_2761 at 3298.568 kb on + strand, within Shewana3_2761 at 3298.627 kb on + strand, within Shewana3_2761 at 3298.680 kb on + strand, within Shewana3_2761
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 3,295,402 - Shewana3_2759 0.40 +0.1 3,295,485 - Shewana3_2759 0.49 -0.2 3,295,553 + Shewana3_2759 0.57 +0.4 3,295,589 + Shewana3_2759 0.61 +0.6 3,295,789 + Shewana3_2759 0.83 +1.0 3,295,858 - -0.1 3,295,889 + +0.1 3,295,892 - +1.0 3,296,005 - +0.7 3,296,005 - -0.0 3,296,923 + Shewana3_2760 0.52 -0.8 3,296,976 + Shewana3_2760 0.55 -0.0 3,297,390 + Shewana3_2760 0.80 +0.2 3,297,413 - Shewana3_2760 0.82 -1.1 3,297,680 + +0.5 3,297,716 + +0.3 3,297,957 - -0.1 3,297,983 - -0.6 3,298,003 + +0.4 3,298,031 - -0.6 3,298,153 + -0.4 3,298,241 - +0.2 3,298,441 + Shewana3_2761 0.13 -0.3 3,298,480 + Shewana3_2761 0.15 +0.3 3,298,568 + Shewana3_2761 0.19 -1.8 3,298,627 + Shewana3_2761 0.22 -0.7 3,298,680 + Shewana3_2761 0.24 -0.8
Or see this region's nucleotide sequence