Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0745 and Shewana3_0746 are separated by 157 nucleotides Shewana3_0746 and Shewana3_0747 are separated by 3 nucleotides
Shewana3_0745: Shewana3_0745 - putative iron-sulfur cluster binding protein (RefSeq), at 864,279 to 865,460
_0745
Shewana3_0746: Shewana3_0746 - extracellular solute-binding protein (RefSeq), at 865,618 to 866,445
_0746
Shewana3_0747: Shewana3_0747 - diguanylate cyclase (RefSeq), at 866,449 to 868,389
_0747
Position (kb)
865
866
867 Strain fitness (log2 ratio)
-1
0
1
2 at 864.786 kb on - strand, within Shewana3_0745 at 864.820 kb on - strand, within Shewana3_0745 at 864.951 kb on + strand, within Shewana3_0745 at 865.149 kb on + strand, within Shewana3_0745 at 865.157 kb on - strand, within Shewana3_0745 at 865.157 kb on - strand, within Shewana3_0745 at 865.392 kb on - strand at 865.510 kb on - strand at 865.530 kb on - strand at 865.629 kb on + strand at 865.655 kb on - strand at 865.672 kb on + strand at 865.672 kb on + strand at 865.672 kb on + strand at 865.763 kb on - strand, within Shewana3_0746 at 865.780 kb on - strand, within Shewana3_0746 at 865.785 kb on - strand, within Shewana3_0746 at 865.813 kb on - strand, within Shewana3_0746 at 865.878 kb on + strand, within Shewana3_0746 at 865.886 kb on - strand, within Shewana3_0746 at 865.919 kb on - strand, within Shewana3_0746 at 866.325 kb on - strand, within Shewana3_0746 at 866.690 kb on + strand, within Shewana3_0747 at 866.767 kb on + strand, within Shewana3_0747 at 866.767 kb on + strand, within Shewana3_0747 at 866.775 kb on - strand, within Shewana3_0747 at 866.779 kb on + strand, within Shewana3_0747 at 866.966 kb on - strand, within Shewana3_0747 at 867.015 kb on - strand, within Shewana3_0747 at 867.196 kb on + strand, within Shewana3_0747 at 867.429 kb on - strand, within Shewana3_0747
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 864,786 - Shewana3_0745 0.43 -0.1 864,820 - Shewana3_0745 0.46 -0.4 864,951 + Shewana3_0745 0.57 -0.0 865,149 + Shewana3_0745 0.74 -0.5 865,157 - Shewana3_0745 0.74 -0.2 865,157 - Shewana3_0745 0.74 +0.0 865,392 - -0.2 865,510 - -1.2 865,530 - +0.3 865,629 + -0.5 865,655 - -1.0 865,672 + -0.3 865,672 + +0.2 865,672 + -0.3 865,763 - Shewana3_0746 0.18 -1.4 865,780 - Shewana3_0746 0.20 -0.5 865,785 - Shewana3_0746 0.20 -0.0 865,813 - Shewana3_0746 0.24 -1.5 865,878 + Shewana3_0746 0.31 -0.5 865,886 - Shewana3_0746 0.32 -0.1 865,919 - Shewana3_0746 0.36 -0.8 866,325 - Shewana3_0746 0.85 -0.5 866,690 + Shewana3_0747 0.12 -0.3 866,767 + Shewana3_0747 0.16 -1.0 866,767 + Shewana3_0747 0.16 +0.5 866,775 - Shewana3_0747 0.17 -0.2 866,779 + Shewana3_0747 0.17 -0.4 866,966 - Shewana3_0747 0.27 +2.1 867,015 - Shewana3_0747 0.29 -1.0 867,196 + Shewana3_0747 0.38 -0.0 867,429 - Shewana3_0747 0.50 -1.5
Or see this region's nucleotide sequence