Strain Fitness in Shewanella loihica PV-4 around Shew_3727

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,440,580	+		Shew_3725	0.75	-0.1
4,440,580	+		Shew_3725	0.75	-0.2
4,441,078	-		Shew_3726	0.82	+0.1
4,441,220	+				+0.2
4,441,220	+				+0.1
4,441,228	-				-0.6
4,441,228	-				-0.2
4,441,245	+				-1.9
4,441,341	+		Shew_3727	0.19	-1.1
4,441,347	+		Shew_3727	0.20	-2.5
4,441,427	-		Shew_3727	0.29	-1.6
4,441,434	+		Shew_3727	0.30	-1.6
4,441,471	+		Shew_3727	0.34	-0.6
4,441,575	-		Shew_3727	0.45	-2.2
4,441,681	-		Shew_3727	0.57	-1.5
4,441,681	-		Shew_3727	0.57	-0.3
4,441,681	-		Shew_3727	0.57	-1.8
4,441,788	-		Shew_3727	0.68	+0.1
4,441,906	+		Shew_3727	0.81	-1.1
4,442,008	-				+0.0
4,442,209	+				-0.1
4,442,209	+				-0.0
4,442,217	-				-0.6
4,442,217	-				-0.1
4,442,392	-		Shew_3728	0.49	-0.1
4,442,417	-		Shew_3728	0.55	+0.6
4,442,437	-		Shew_3728	0.60	-0.4
4,442,577	-				+0.8
4,442,690	-				-0.1
4,442,811	+		Shew_3729	0.16	+0.1
4,442,909	+		Shew_3729	0.27	+0.8