Strain Fitness in Shewanella loihica PV-4 around Shew_3502

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,187,449	+		Shew_3501	0.30	+0.6
4,187,771	-		Shew_3501	0.75	-0.0
4,187,803	+		Shew_3501	0.80	+0.9
4,187,803	+		Shew_3501	0.80	-0.1
4,187,811	-		Shew_3501	0.81	+0.1
4,187,813	+		Shew_3501	0.81	-0.1
4,187,818	+		Shew_3501	0.82	+0.0
4,188,273	-				+0.3
4,188,297	+				-0.6
4,188,414	-				-0.3
4,188,452	+		Shew_3502	0.10	-0.2
4,188,460	-		Shew_3502	0.11	+0.1
4,188,507	-		Shew_3502	0.13	+0.0
4,188,535	+		Shew_3502	0.15	-0.7
4,188,552	+		Shew_3502	0.16	+0.9
4,188,774	-		Shew_3502	0.29	-1.0
4,188,783	+		Shew_3502	0.30	+0.1
4,188,822	+		Shew_3502	0.32	+0.2
4,188,843	-		Shew_3502	0.34	+0.7
4,188,843	-		Shew_3502	0.34	+0.3
4,188,885	+		Shew_3502	0.36	-0.8
4,189,464	+		Shew_3502	0.71	+0.1
4,189,676	+		Shew_3502	0.84	+0.2
4,189,676	+		Shew_3502	0.84	+0.2
4,189,684	-		Shew_3502	0.84	+0.2
4,189,893	+				+0.6
4,189,893	+				+0.0
4,190,101	+				+0.2
4,190,163	-				+0.5
4,190,211	-				+0.5
4,190,466	-		Shew_3503	0.37	-1.4
4,190,515	-		Shew_3503	0.43	+0.6
4,190,515	-		Shew_3503	0.43	+0.2
4,190,824	+		Shew_3503	0.76	+0.1
4,190,824	+		Shew_3503	0.76	+0.2
4,190,832	-		Shew_3503	0.77	+0.2
4,190,832	-		Shew_3503	0.77	+0.3
4,190,880	+		Shew_3503	0.82	+0.1