Strain Fitness in Shewanella loihica PV-4 around Shew_3474

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,159,442	-		Shew_3473	0.57	+0.4
4,159,476	-		Shew_3473	0.59	+1.0
4,159,519	-		Shew_3473	0.62	+0.4
4,159,651	+		Shew_3473	0.69	+0.1
4,159,770	-		Shew_3473	0.76	+0.3
4,159,817	-		Shew_3473	0.79	+0.3
4,159,999	-		Shew_3473	0.89	-0.1
4,160,455	+		Shew_3474	0.11	-0.4
4,160,529	-		Shew_3474	0.15	-0.8
4,160,579	-		Shew_3474	0.18	-0.2
4,160,583	+		Shew_3474	0.18	-0.1
4,160,616	+		Shew_3474	0.20	-0.1
4,160,673	+		Shew_3474	0.23	-0.6
4,160,793	+		Shew_3474	0.29	-0.2
4,160,866	+		Shew_3474	0.33	+0.2
4,160,866	+		Shew_3474	0.33	+0.2
4,160,874	-		Shew_3474	0.34	-0.1
4,161,971	-				-0.4
4,161,994	-				-0.6
4,161,994	-				-0.2
4,162,141	+				-0.9
4,162,307	-				-0.0
4,162,312	-				+0.0
4,162,353	-				+1.3
4,162,632	-		Shew_3475	0.66	+0.2
4,162,848	+				+0.2
4,162,856	-				+0.3
4,162,921	+				-0.9
4,163,023	+				+0.7
4,163,084	-		Shew_3476	0.15	-0.3