Strain Fitness in Shewanella loihica PV-4 around Shew_3408

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,057,736	+		Shew_3407	0.17	-0.0
4,057,818	+		Shew_3407	0.26	+0.3
4,057,851	+		Shew_3407	0.29	+0.3
4,057,851	+		Shew_3407	0.29	-0.4
4,057,921	-		Shew_3407	0.37	-0.3
4,057,936	+		Shew_3407	0.38	-0.1
4,057,943	+		Shew_3407	0.39	-0.2
4,057,959	+		Shew_3407	0.41	+0.4
4,058,004	+		Shew_3407	0.46	+0.3
4,058,054	-		Shew_3407	0.51	-0.3
4,058,075	+		Shew_3407	0.53	-0.1
4,058,250	-		Shew_3407	0.72	+1.0
4,058,250	-		Shew_3407	0.72	-0.3
4,058,287	+		Shew_3407	0.76	+0.2
4,058,450	-				+0.7
4,058,627	+				+0.2
4,058,885	-		Shew_3408	0.37	-0.9
4,058,977	+		Shew_3408	0.49	-0.5
4,058,990	-		Shew_3408	0.51	+0.1
4,059,156	+		Shew_3408	0.74	-1.1
4,059,228	+		Shew_3408	0.84	-0.3
4,059,324	-				-0.4
4,059,522	-				-0.1
4,059,522	-				+0.5
4,059,525	+				+0.7
4,059,875	+		Shew_3409	0.13	+0.2
4,059,883	-		Shew_3409	0.14	-0.3
4,059,971	-		Shew_3409	0.23	-0.5
4,059,980	+		Shew_3409	0.24	+0.3
4,060,070	-		Shew_3409	0.32	-0.3
4,060,086	+		Shew_3409	0.34	-0.1
4,060,267	-		Shew_3409	0.51	+0.8