Strain Fitness in Shewanella loihica PV-4 around Shew_3016

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,581,060	+		Shew_3015	0.38	+0.0
3,581,060	+		Shew_3015	0.38	+0.1
3,581,068	-		Shew_3015	0.38	+0.0
3,581,171	+		Shew_3015	0.47	+0.8
3,581,253	+		Shew_3015	0.53	+0.2
3,581,261	-		Shew_3015	0.54	-0.2
3,581,261	-		Shew_3015	0.54	+0.0
3,581,298	+		Shew_3015	0.57	-1.1
3,581,357	-		Shew_3015	0.62	-0.8
3,581,424	+		Shew_3015	0.67	+0.1
3,581,663	+		Shew_3015	0.86	+0.1
3,581,984	-				+0.2
3,582,406	+		Shew_3016	0.61	+0.7
3,582,576	+		Shew_3016	0.82	+1.0
3,582,610	+		Shew_3016	0.87	+0.4
3,582,613	-		Shew_3016	0.87	+0.1
3,582,921	+				-0.1
3,583,257	+		Shew_3017	0.36	-2.2
3,583,382	-		Shew_3017	0.45	+0.5
3,583,400	+		Shew_3017	0.47	-0.0
3,583,508	+		Shew_3017	0.55	-0.4
3,583,631	+		Shew_3017	0.64	-0.5