Strain Fitness in Shewanella loihica PV-4 around Shew_2868

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,403,513	-		Shew_2867	0.88	-0.6
3,403,546	-		Shew_2867	0.89	-1.2
3,403,674	+				-0.5
3,403,934	+				-0.5
3,403,942	-				-0.8
3,404,079	+				-0.4
3,404,079	+				-0.6
3,404,394	+				+0.3
3,404,394	+				+0.1
3,404,402	-				+0.3
3,404,402	-				-0.6
3,404,402	-				+0.2
3,404,708	+		Shew_2868	0.16	+0.3
3,404,727	-		Shew_2868	0.17	-1.0
3,404,825	+		Shew_2868	0.23	-0.3
3,404,955	+		Shew_2868	0.30	-1.8
3,405,202	+		Shew_2868	0.44	-1.1
3,405,569	-		Shew_2868	0.64	-0.4
3,405,635	-		Shew_2868	0.67	-0.0
3,406,278	-				+1.4
3,406,447	-				-1.2
3,406,516	-				-0.0
3,406,570	+				+0.2
3,406,695	-		Shew_2869	0.13	-0.4
3,406,716	+		Shew_2869	0.14	+0.2
3,407,107	+		Shew_2869	0.34	-2.0