Strain Fitness in Shewanella loihica PV-4 around Shew_2857

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,387,552	+				+0.3
3,387,579	+				-0.7
3,387,588	+				+0.3
3,387,589	-				-0.0
3,387,596	-				-0.2
3,387,641	+				-0.7
3,387,666	-				+0.2
3,387,666	-				+0.6
3,387,666	-				-0.7
3,387,679	-				-0.7
3,387,785	-				+0.5
3,387,851	-				+0.3
3,388,316	-				-0.1
3,388,396	-				+0.4
3,388,523	+				+0.1
3,388,602	-		Shew_2857	0.15	-3.0
3,388,744	-		Shew_2857	0.31	-1.3
3,389,245	-		Shew_2857	0.87	-0.3
3,389,245	-		Shew_2857	0.87	-0.4
3,389,378	-				+0.4
3,389,796	+		Shew_2858	0.21	+0.6
3,389,810	-		Shew_2858	0.22	-0.2
3,389,866	+		Shew_2858	0.27	+0.1
3,389,906	+		Shew_2858	0.30	+0.9
3,390,026	+		Shew_2858	0.40	-0.0
3,390,026	+		Shew_2858	0.40	+0.1
3,390,034	-		Shew_2858	0.41	+0.2