Strain Fitness in Shewanella loihica PV-4 around Shew_2391

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,803,985	-		Shew_2390	0.65	-0.5
2,804,127	+		Shew_2390	0.71	+0.2
2,804,127	+		Shew_2390	0.71	+0.4
2,804,495	-		Shew_2390	0.88	+0.3
2,804,495	-		Shew_2390	0.88	-0.3
2,804,551	-				+0.8
2,804,663	-				-0.0
2,804,720	-				-1.5
2,805,149	+	pflA	Shew_2391	0.36	-0.4
2,805,154	+	pflA	Shew_2391	0.37	-1.1
2,805,162	-	pflA	Shew_2391	0.38	-0.3
2,805,162	-	pflA	Shew_2391	0.38	+0.7
2,805,183	+	pflA	Shew_2391	0.41	-2.6
2,806,022	-		Shew_2392	0.89	-1.0
2,806,107	-				-1.7
2,806,197	+				-0.1
2,806,370	-				-1.7