Strain Fitness in Shewanella loihica PV-4 around Shew_0232
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 246,334 | - | Shew_0231 | 0.52 | +0.1 | |
| 246,391 | - | Shew_0231 | 0.57 | -0.3 | |
| 246,690 | - | Shew_0231 | 0.80 | +0.2 | |
| 247,136 | - | -0.1 | |||
| 247,235 | - | Shew_0232 | 0.26 | +0.9 | |
| 247,264 | - | Shew_0232 | 0.33 | +1.5 | |
| 247,415 | - | Shew_0232 | 0.71 | -0.1 | |
| 247,415 | - | Shew_0232 | 0.71 | -0.6 | |
| 247,420 | - | Shew_0232 | 0.72 | +0.1 | |
| 247,587 | - | -0.0 | |||
| 247,685 | - | +0.3 | |||
| 247,745 | + | +0.1 | |||
| 248,066 | + | Shew_0233 | 0.17 | -0.1 | |
| 248,076 | - | Shew_0233 | 0.18 | +0.3 | |
| 248,083 | + | Shew_0233 | 0.18 | +0.3 | |
| 248,100 | - | Shew_0233 | 0.19 | +0.1 | |
| 248,296 | - | Shew_0233 | 0.27 | +0.2 | |
| 248,504 | + | Shew_0233 | 0.36 | +0.2 | |
| 248,504 | + | Shew_0233 | 0.36 | +0.2 |
Or see this region's nucleotide sequence