Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS13095

Experiment: R2A with arsenate 31.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with arsenate 31.25 mM
2,931,596	+		LRK54_RS13090	0.16	-0.9
2,931,596	+		LRK54_RS13090	0.16	+0.5
2,931,596	+		LRK54_RS13090	0.16	-0.6
2,931,596	+		LRK54_RS13090	0.16	+0.9
2,931,596	+		LRK54_RS13090	0.16	+0.9
2,931,597	-		LRK54_RS13090	0.17	-0.7
2,931,597	-		LRK54_RS13090	0.17	-0.4
2,931,597	-		LRK54_RS13090	0.17	-0.4
2,931,597	-		LRK54_RS13090	0.17	+0.2
2,931,597	-		LRK54_RS13090	0.17	+0.4
2,931,597	-		LRK54_RS13090	0.17	+0.4
2,931,597	-		LRK54_RS13090	0.17	-0.8
2,931,597	-		LRK54_RS13090	0.17	-1.8
2,931,597	-		LRK54_RS13090	0.17	-0.4
2,931,612	-		LRK54_RS13090	0.18	-0.0
2,931,648	-		LRK54_RS13090	0.22	-0.9
2,931,648	-		LRK54_RS13090	0.22	-0.9
2,931,648	-		LRK54_RS13090	0.22	-0.2
2,931,648	-		LRK54_RS13090	0.22	+0.6
2,931,648	-		LRK54_RS13090	0.22	-2.4
2,931,707	+		LRK54_RS13090	0.28	+0.8
2,931,708	-		LRK54_RS13090	0.28	-0.3
2,931,708	-		LRK54_RS13090	0.28	-0.4
2,931,841	+		LRK54_RS13090	0.41	+0.3
2,931,842	-		LRK54_RS13090	0.41	+0.1
2,931,857	+		LRK54_RS13090	0.43	-1.2
2,931,857	+		LRK54_RS13090	0.43	-0.8
2,931,857	+		LRK54_RS13090	0.43	+0.1
2,931,857	+		LRK54_RS13090	0.43	+0.2
2,931,857	+		LRK54_RS13090	0.43	+0.4
2,931,857	+		LRK54_RS13090	0.43	-2.3
2,931,857	+		LRK54_RS13090	0.43	+1.5
2,931,857	+		LRK54_RS13090	0.43	+0.2
2,931,857	+		LRK54_RS13090	0.43	-0.5
2,931,858	-		LRK54_RS13090	0.43	-0.7
2,931,858	-		LRK54_RS13090	0.43	-0.9
2,931,858	-		LRK54_RS13090	0.43	-0.4
2,931,858	-		LRK54_RS13090	0.43	-0.3
2,931,858	-		LRK54_RS13090	0.43	+0.3
2,931,858	-		LRK54_RS13090	0.43	-0.1
2,931,890	+		LRK54_RS13090	0.46	+0.6
2,931,890	+		LRK54_RS13090	0.46	-1.9
2,931,890	+		LRK54_RS13090	0.46	-0.3
2,931,890	+		LRK54_RS13090	0.46	+0.4
2,931,890	+		LRK54_RS13090	0.46	-0.1
2,931,890	+		LRK54_RS13090	0.46	-0.2
2,931,890	+		LRK54_RS13090	0.46	-0.4
2,931,890	+		LRK54_RS13090	0.46	+0.3
2,931,890	+		LRK54_RS13090	0.46	-0.8
2,931,890	+		LRK54_RS13090	0.46	-1.2
2,931,891	-		LRK54_RS13090	0.46	-0.4
2,931,891	-		LRK54_RS13090	0.46	-2.2
2,931,891	-		LRK54_RS13090	0.46	-1.4
2,931,891	-		LRK54_RS13090	0.46	-0.9
2,931,891	-		LRK54_RS13090	0.46	-0.2
2,931,891	-		LRK54_RS13090	0.46	-1.4
2,931,891	-		LRK54_RS13090	0.46	-1.0
2,931,891	-		LRK54_RS13090	0.46	+0.4
2,931,891	-		LRK54_RS13090	0.46	-0.4
2,931,891	-		LRK54_RS13090	0.46	-0.1
2,931,891	-		LRK54_RS13090	0.46	+0.8
2,931,891	-		LRK54_RS13090	0.46	+0.1
2,931,906	-		LRK54_RS13090	0.47	-0.3
2,931,999	+		LRK54_RS13090	0.57	-0.1
2,931,999	+		LRK54_RS13090	0.57	+1.5
2,931,999	+		LRK54_RS13090	0.57	-0.9
2,931,999	+		LRK54_RS13090	0.57	+0.5
2,931,999	+		LRK54_RS13090	0.57	+0.5
2,931,999	+		LRK54_RS13090	0.57	+0.1
2,932,000	-		LRK54_RS13090	0.57	-0.3
2,932,000	-		LRK54_RS13090	0.57	+0.5
2,932,000	-		LRK54_RS13090	0.57	+0.3
2,932,000	-		LRK54_RS13090	0.57	-1.8
2,932,000	-		LRK54_RS13090	0.57	-1.4
2,932,000	-		LRK54_RS13090	0.57	+0.5
2,932,000	-		LRK54_RS13090	0.57	-0.7
2,932,147	+		LRK54_RS13090	0.71	-0.5
2,932,193	-		LRK54_RS13090	0.76	-0.7
2,932,193	-		LRK54_RS13090	0.76	+0.1
2,932,193	-		LRK54_RS13090	0.76	-1.6
2,932,193	-		LRK54_RS13090	0.76	-0.4
2,932,226	+		LRK54_RS13090	0.79	+1.1
2,932,226	+		LRK54_RS13090	0.79	+0.2
2,932,274	+		LRK54_RS13090	0.84	+2.5
2,932,275	-		LRK54_RS13090	0.84	+0.2
2,932,275	-		LRK54_RS13090	0.84	+0.2
2,932,275	-		LRK54_RS13090	0.84	+2.8
2,932,292	+		LRK54_RS13090	0.86	+0.2
2,932,292	+		LRK54_RS13090	0.86	-0.5
2,932,292	+		LRK54_RS13090	0.86	+0.5
2,932,293	-		LRK54_RS13090	0.86	-1.0
2,932,293	-		LRK54_RS13090	0.86	+1.6
2,932,357	-				-0.9
2,932,404	-				+0.3
2,932,404	-				-0.8
2,932,404	-				-0.7
2,932,430	+				+0.3
2,932,431	-				+0.6
2,932,431	-				+0.9
2,932,431	-				-0.2
2,932,431	-				+0.8
2,932,431	-				-0.5
2,932,431	-				-1.4
2,932,502	+				+0.9
2,932,502	+				+1.2
2,932,502	+				-0.1
2,932,502	+				+1.0
2,932,502	+				-0.7
2,932,502	+				-0.1
2,932,502	+				+0.8
2,932,502	+				+1.3
2,932,502	+				-0.1
2,932,502	+				-0.3
2,932,502	+				-0.5
2,932,502	+				+0.7
2,932,502	+				-1.3
2,932,502	+				-2.2
2,932,502	+				-0.8
2,932,502	+				-2.0
2,932,502	+				-1.1
2,932,502	+				+1.0
2,932,502	+				+0.2
2,932,502	+				-1.2
2,932,502	+				-0.3
2,932,502	+				-1.1
2,932,502	+				+0.9
2,932,502	+				+0.8
2,932,502	+				-0.6
2,932,503	-				+0.0
2,932,503	-				+0.4
2,932,503	-				+1.0
2,932,503	-				-1.7
2,932,503	-				-1.6
2,932,503	-				-1.9
2,932,503	-				-0.3
2,932,503	-				+0.5
2,932,528	+				-0.1
2,932,528	+				-0.6
2,932,528	+				+1.4
2,932,529	-				-0.2
2,932,529	-				-0.2
2,932,529	-				+0.6
2,932,529	-				+1.0
2,932,529	-				+0.3
2,932,630	+				-2.0
2,932,630	+				+1.1
2,932,630	+				-0.6
2,932,630	+				-0.4
2,932,630	+				-1.5
2,932,630	+				+1.0
2,932,631	-				-1.2
2,932,631	-				+1.3
2,932,631	-				-1.9
2,932,631	-				-0.4
2,932,631	-				-0.2
2,932,631	-				+0.6
2,932,631	-				-0.3
2,932,702	+		LRK54_RS13095	0.11	+1.3
2,932,702	+		LRK54_RS13095	0.11	-0.6
2,932,702	+		LRK54_RS13095	0.11	-1.3
2,932,702	+		LRK54_RS13095	0.11	+2.2
2,932,702	+		LRK54_RS13095	0.11	+0.0
2,932,702	+		LRK54_RS13095	0.11	+0.2
2,932,703	-		LRK54_RS13095	0.11	-2.9
2,932,703	-		LRK54_RS13095	0.11	+0.5
2,932,703	-		LRK54_RS13095	0.11	+0.4
2,932,703	-		LRK54_RS13095	0.11	+0.5
2,932,717	+		LRK54_RS13095	0.11	-0.9
2,932,717	+		LRK54_RS13095	0.11	-0.9
2,932,717	+		LRK54_RS13095	0.11	+0.1
2,932,717	+		LRK54_RS13095	0.11	+0.5
2,932,717	+		LRK54_RS13095	0.11	-1.2
2,932,717	+		LRK54_RS13095	0.11	-0.9
2,932,717	+		LRK54_RS13095	0.11	+0.1
2,932,717	+		LRK54_RS13095	0.11	-0.6
2,932,717	+		LRK54_RS13095	0.11	-0.9
2,932,717	+		LRK54_RS13095	0.11	+0.1
2,932,717	+		LRK54_RS13095	0.11	-0.6
2,932,717	+		LRK54_RS13095	0.11	-2.5
2,932,717	+		LRK54_RS13095	0.11	+0.2
2,932,717	+		LRK54_RS13095	0.11	+0.3
2,932,717	+		LRK54_RS13095	0.11	+0.1
2,932,717	+		LRK54_RS13095	0.11	+0.6
2,932,717	+		LRK54_RS13095	0.11	+1.8
2,932,718	-		LRK54_RS13095	0.12	+0.7
2,932,718	-		LRK54_RS13095	0.12	+0.5
2,932,718	-		LRK54_RS13095	0.12	-2.2
2,932,718	-		LRK54_RS13095	0.12	+0.6
2,932,718	-		LRK54_RS13095	0.12	-0.7
2,932,718	-		LRK54_RS13095	0.12	+1.2
2,932,718	-		LRK54_RS13095	0.12	-0.0
2,932,718	-		LRK54_RS13095	0.12	-0.1
2,932,718	-		LRK54_RS13095	0.12	-0.3
2,932,718	-		LRK54_RS13095	0.12	+1.7
2,932,718	-		LRK54_RS13095	0.12	-0.9
2,932,718	-		LRK54_RS13095	0.12	-0.4
2,932,718	-		LRK54_RS13095	0.12	+0.3
2,932,718	-		LRK54_RS13095	0.12	+0.4
2,932,718	-		LRK54_RS13095	0.12	+0.4
2,932,718	-		LRK54_RS13095	0.12	+0.1
2,932,867	+		LRK54_RS13095	0.21	-0.5
2,932,867	+		LRK54_RS13095	0.21	+0.2
2,932,867	+		LRK54_RS13095	0.21	-0.9
2,932,867	+		LRK54_RS13095	0.21	+0.4
2,932,867	+		LRK54_RS13095	0.21	+0.5
2,932,867	+		LRK54_RS13095	0.21	+0.5
2,932,867	+		LRK54_RS13095	0.21	+1.0
2,932,867	+		LRK54_RS13095	0.21	-0.2
2,932,867	+		LRK54_RS13095	0.21	-1.1
2,932,867	+		LRK54_RS13095	0.21	-0.8
2,932,867	+		LRK54_RS13095	0.21	-0.6
2,932,868	-		LRK54_RS13095	0.21	-0.4
2,932,868	-		LRK54_RS13095	0.21	-0.4
2,932,868	-		LRK54_RS13095	0.21	+0.4
2,932,868	-		LRK54_RS13095	0.21	-1.7
2,932,868	-		LRK54_RS13095	0.21	-1.6
2,932,868	-		LRK54_RS13095	0.21	-1.1
2,932,868	-		LRK54_RS13095	0.21	-1.2
2,932,879	+		LRK54_RS13095	0.21	+0.2
2,932,880	-		LRK54_RS13095	0.21	-1.2
2,932,880	-		LRK54_RS13095	0.21	-0.8
2,932,880	-		LRK54_RS13095	0.21	-1.4
2,932,880	-		LRK54_RS13095	0.21	-0.8
2,932,880	-		LRK54_RS13095	0.21	-1.5
2,932,880	-		LRK54_RS13095	0.21	-1.4
2,932,880	-		LRK54_RS13095	0.21	-0.9
2,933,012	-		LRK54_RS13095	0.29	-0.1
2,933,012	-		LRK54_RS13095	0.29	-0.1
2,933,029	+		LRK54_RS13095	0.30	+0.0
2,933,029	+		LRK54_RS13095	0.30	+0.8
2,933,029	+		LRK54_RS13095	0.30	-1.4
2,933,029	+		LRK54_RS13095	0.30	-0.2
2,933,029	+		LRK54_RS13095	0.30	-1.1
2,933,030	-		LRK54_RS13095	0.30	-0.5
2,933,030	-		LRK54_RS13095	0.30	+0.1
2,933,030	-		LRK54_RS13095	0.30	-1.5
2,933,030	-		LRK54_RS13095	0.30	-1.2
2,933,032	+		LRK54_RS13095	0.31	-0.9
2,933,032	+		LRK54_RS13095	0.31	-0.7
2,933,032	+		LRK54_RS13095	0.31	+0.5
2,933,033	-		LRK54_RS13095	0.31	-0.4
2,933,033	-		LRK54_RS13095	0.31	+0.4
2,933,033	-		LRK54_RS13095	0.31	-0.9
2,933,033	-		LRK54_RS13095	0.31	-2.2
2,933,033	-		LRK54_RS13095	0.31	-0.5
2,933,033	-		LRK54_RS13095	0.31	+1.4
2,933,173	+		LRK54_RS13095	0.39	-0.1
2,933,173	+		LRK54_RS13095	0.39	-0.5
2,933,173	+		LRK54_RS13095	0.39	+0.7
2,933,173	+		LRK54_RS13095	0.39	-0.7
2,933,173	+		LRK54_RS13095	0.39	+0.0
2,933,173	+		LRK54_RS13095	0.39	-0.8
2,933,174	-		LRK54_RS13095	0.39	-0.5
2,933,174	-		LRK54_RS13095	0.39	-0.7
2,933,174	-		LRK54_RS13095	0.39	-1.1
2,933,174	-		LRK54_RS13095	0.39	-1.8
2,933,174	-		LRK54_RS13095	0.39	-0.6
2,933,174	-		LRK54_RS13095	0.39	+2.1
2,933,174	-		LRK54_RS13095	0.39	-0.1
2,933,174	-		LRK54_RS13095	0.39	-0.7
2,933,233	+		LRK54_RS13095	0.43	-0.9
2,933,233	+		LRK54_RS13095	0.43	+0.1
2,933,233	+		LRK54_RS13095	0.43	-1.4
2,933,233	+		LRK54_RS13095	0.43	+0.1
2,933,233	+		LRK54_RS13095	0.43	+0.4
2,933,233	+		LRK54_RS13095	0.43	-1.3
2,933,233	+		LRK54_RS13095	0.43	-0.0
2,933,233	+		LRK54_RS13095	0.43	-1.1
2,933,233	+		LRK54_RS13095	0.43	-1.5
2,933,234	-		LRK54_RS13095	0.43	-0.2
2,933,234	-		LRK54_RS13095	0.43	-0.5
2,933,234	-		LRK54_RS13095	0.43	-0.8
2,933,234	-		LRK54_RS13095	0.43	-0.7
2,933,234	-		LRK54_RS13095	0.43	+0.6
2,933,234	-		LRK54_RS13095	0.43	+0.5
2,933,234	-		LRK54_RS13095	0.43	+1.0
2,933,234	-		LRK54_RS13095	0.43	-0.9
2,933,496	+		LRK54_RS13095	0.59	+0.2
2,933,539	+		LRK54_RS13095	0.61	-0.4
2,933,539	+		LRK54_RS13095	0.61	-1.4
2,933,539	+		LRK54_RS13095	0.61	-0.4
2,933,539	+		LRK54_RS13095	0.61	-0.3
2,933,539	+		LRK54_RS13095	0.61	-1.6
2,933,539	+		LRK54_RS13095	0.61	-0.9
2,933,539	+		LRK54_RS13095	0.61	+0.1
2,933,540	-		LRK54_RS13095	0.61	+0.5
2,933,540	-		LRK54_RS13095	0.61	+0.1
2,933,540	-		LRK54_RS13095	0.61	+0.8
2,933,540	-		LRK54_RS13095	0.61	+0.6
2,933,540	-		LRK54_RS13095	0.61	-0.5
2,933,540	-		LRK54_RS13095	0.61	+0.6
2,933,540	-		LRK54_RS13095	0.61	-0.4
2,933,605	+		LRK54_RS13095	0.65	-1.5
2,933,605	+		LRK54_RS13095	0.65	-0.2
2,933,605	+		LRK54_RS13095	0.65	+0.6
2,933,605	+		LRK54_RS13095	0.65	+0.3
2,933,605	+		LRK54_RS13095	0.65	-0.2
2,933,605	+		LRK54_RS13095	0.65	-0.4
2,933,605	+		LRK54_RS13095	0.65	-0.6
2,933,605	+		LRK54_RS13095	0.65	-0.3
2,933,605	+		LRK54_RS13095	0.65	-1.0
2,933,605	+		LRK54_RS13095	0.65	-0.1
2,933,606	-		LRK54_RS13095	0.65	-1.6
2,933,606	-		LRK54_RS13095	0.65	+0.1
2,933,606	-		LRK54_RS13095	0.65	+0.0
2,933,606	-		LRK54_RS13095	0.65	+0.3
2,933,611	+		LRK54_RS13095	0.66	+0.7
2,933,611	+		LRK54_RS13095	0.66	-0.6
2,933,611	+		LRK54_RS13095	0.66	-1.0
2,933,611	+		LRK54_RS13095	0.66	+2.2
2,933,611	+		LRK54_RS13095	0.66	-1.8
2,933,611	+		LRK54_RS13095	0.66	+2.0
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2,933,611	+		LRK54_RS13095	0.66	-1.1
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2,934,522	+		LRK54_RS13100	0.60	-1.1
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