Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22990

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
5,626,098	-		CA265_RS22985	0.77	-0.0
5,626,101	+		CA265_RS22985	0.77	+0.3
5,626,129	-		CA265_RS22985	0.78	-1.4
5,626,137	+		CA265_RS22985	0.78	+0.6
5,626,170	+		CA265_RS22985	0.79	-0.0
5,626,192	+		CA265_RS22985	0.80	+0.2
5,626,192	+		CA265_RS22985	0.80	-1.8
5,626,193	-		CA265_RS22985	0.80	-2.7
5,626,264	+		CA265_RS22985	0.82	-0.2
5,626,394	-		CA265_RS22985	0.87	-0.6
5,626,397	+		CA265_RS22985	0.87	+0.3
5,626,397	+		CA265_RS22985	0.87	+1.0
5,626,532	+				-0.9
5,626,587	-				+0.7
5,626,594	-				+1.1
5,626,600	+				-0.0
5,626,712	+				+0.2
5,626,734	-				-1.6
5,626,744	-				+1.7
5,626,753	-				+0.5
5,626,758	+				+0.1
5,626,769	-				+0.8
5,626,800	+				-0.6
5,626,801	-				+0.4
5,626,824	+				-0.2
5,626,829	+				+1.2
5,626,840	+				+1.1
5,626,840	+				-0.4
5,626,909	+				+0.4
5,626,972	-				+0.5
5,626,973	+				+0.4
5,626,988	+				+0.4
5,627,005	+				+0.1
5,627,012	-				+0.0
5,627,052	-				+0.3
5,627,135	+				-1.6
5,627,138	-				+0.2
5,627,209	-		CA265_RS22990	0.15	+0.5
5,627,253	-		CA265_RS22990	0.20	-0.1
5,627,263	-		CA265_RS22990	0.21	+0.5
5,627,350	-		CA265_RS22990	0.29	+0.6
5,627,357	+		CA265_RS22990	0.30	-0.2
5,627,357	+		CA265_RS22990	0.30	-1.3
5,627,359	+		CA265_RS22990	0.30	-1.4
5,627,437	-		CA265_RS22990	0.38	+1.1
5,627,447	+		CA265_RS22990	0.39	+1.0
5,627,447	+		CA265_RS22990	0.39	-0.5
5,627,447	+		CA265_RS22990	0.39	+1.6
5,627,448	-		CA265_RS22990	0.39	+0.3
5,627,448	-		CA265_RS22990	0.39	+1.5
5,627,518	+		CA265_RS22990	0.46	+2.0
5,627,542	-		CA265_RS22990	0.48	+0.6
5,627,615	-		CA265_RS22990	0.55	+1.3
5,627,615	-		CA265_RS22990	0.55	+0.6
5,627,623	-		CA265_RS22990	0.56	+0.7
5,627,624	+		CA265_RS22990	0.56	-0.2
5,627,625	-		CA265_RS22990	0.56	-1.1
5,627,625	-		CA265_RS22990	0.56	-1.6
5,627,626	+		CA265_RS22990	0.57	+0.6
5,627,626	+		CA265_RS22990	0.57	+1.2
5,627,750	-		CA265_RS22990	0.69	+1.1
5,627,750	-		CA265_RS22990	0.69	+0.1
5,627,917	+		CA265_RS22990	0.85	+0.3
5,627,918	-		CA265_RS22990	0.85	+0.4
5,627,932	-		CA265_RS22990	0.87	+0.5
5,627,945	+		CA265_RS22990	0.88	+0.5
5,627,945	+		CA265_RS22990	0.88	-0.2
5,627,952	-		CA265_RS22990	0.89	+0.4
5,627,959	-		CA265_RS22990	0.90	+0.4
5,627,982	+				+2.6
5,628,013	+				+0.1
5,628,022	-				+0.7
5,628,079	-				+0.2
5,628,122	+				+0.3
5,628,123	-				+0.6
5,628,126	-				+0.7
5,628,126	-				+0.7
5,628,182	+				-0.5
5,628,200	+				-0.6
5,628,225	-				-0.5
5,628,285	+				+1.5
5,628,285	+				+0.7
5,628,315	+				+0.0
5,628,350	-				-0.6
5,628,350	-				+0.4
5,628,426	+		CA265_RS22995	0.10	+0.6
5,628,511	+		CA265_RS22995	0.13	-0.3
5,628,518	-		CA265_RS22995	0.13	-0.5
5,628,547	+		CA265_RS22995	0.14	+0.6
5,628,548	-		CA265_RS22995	0.14	-0.7
5,628,590	-		CA265_RS22995	0.15	+0.5
5,628,598	-		CA265_RS22995	0.15	+0.3
5,628,641	-		CA265_RS22995	0.16	-0.5
5,628,653	+		CA265_RS22995	0.17	+0.7
5,628,688	-		CA265_RS22995	0.18	+0.4
5,628,732	-		CA265_RS22995	0.19	+1.3
5,628,757	+		CA265_RS22995	0.20	+0.3
5,628,757	+		CA265_RS22995	0.20	+0.0
5,628,786	+		CA265_RS22995	0.21	+0.3
5,628,802	+		CA265_RS22995	0.21	-0.5
5,628,840	+		CA265_RS22995	0.22	+0.9
5,628,843	+		CA265_RS22995	0.22	+0.7
5,628,843	+		CA265_RS22995	0.22	+0.7
5,628,844	-		CA265_RS22995	0.22	-0.4
5,628,855	-		CA265_RS22995	0.22	+0.8
5,628,855	-		CA265_RS22995	0.22	+0.2
5,628,883	+		CA265_RS22995	0.23	+0.2
5,628,985	+		CA265_RS22995	0.26	-0.1
5,628,993	+		CA265_RS22995	0.26	-0.3
5,628,994	-		CA265_RS22995	0.26	-0.4
5,629,025	-		CA265_RS22995	0.27	-0.8
5,629,059	+		CA265_RS22995	0.28	-0.4
5,629,062	+		CA265_RS22995	0.28	-0.1