Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20400

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
5,042,155	+		CA265_RS20390	0.29	+0.4
5,042,174	+		CA265_RS20390	0.31	-0.0
5,042,174	+		CA265_RS20390	0.31	-0.3
5,042,175	-		CA265_RS20390	0.31	-0.1
5,042,389	-		CA265_RS20390	0.60	+0.9
5,042,389	-		CA265_RS20390	0.60	-0.4
5,042,503	+		CA265_RS20390	0.75	+0.5
5,042,504	-		CA265_RS20390	0.75	+0.8
5,042,547	+		CA265_RS20390	0.81	+0.1
5,042,556	-		CA265_RS20390	0.82	+1.0
5,042,560	-		CA265_RS20390	0.83	-0.9
5,042,594	+		CA265_RS20390	0.87	+0.2
5,042,619	-				+0.3
5,042,647	+				+0.3
5,042,681	+				+0.3
5,042,682	-				+0.1
5,042,815	-		CA265_RS20395	0.40	-0.1
5,042,859	-		CA265_RS20395	0.53	-0.6
5,042,870	+		CA265_RS20395	0.56	-1.5
5,042,961	+		CA265_RS20395	0.85	-1.1
5,042,988	-				-0.1
5,042,998	+				+0.1
5,043,179	+				-0.2
5,043,183	-				+1.3
5,043,307	-		CA265_RS20400	0.20	-0.4
5,043,336	-		CA265_RS20400	0.23	+1.0
5,043,336	-		CA265_RS20400	0.23	+0.2
5,043,359	+		CA265_RS20400	0.25	+0.1
5,043,442	-		CA265_RS20400	0.34	-0.2
5,043,443	+		CA265_RS20400	0.34	-0.4
5,043,443	+		CA265_RS20400	0.34	-0.2
5,043,443	+		CA265_RS20400	0.34	-0.7
5,043,443	+		CA265_RS20400	0.34	-0.1
5,043,444	-		CA265_RS20400	0.34	-0.6
5,043,447	+		CA265_RS20400	0.34	-0.9
5,043,447	+		CA265_RS20400	0.34	-0.0
5,043,448	-		CA265_RS20400	0.34	-0.4
5,043,477	-		CA265_RS20400	0.37	-2.1
5,043,682	-		CA265_RS20400	0.57	+0.1
5,043,682	-		CA265_RS20400	0.57	-0.3
5,043,708	+		CA265_RS20400	0.60	+1.2
5,043,719	+		CA265_RS20400	0.61	-0.7
5,043,784	+		CA265_RS20400	0.68	+0.1
5,043,786	+		CA265_RS20400	0.68	-1.6
5,043,872	+		CA265_RS20400	0.76	-0.7
5,043,930	-		CA265_RS20400	0.82	+0.7
5,043,939	-		CA265_RS20400	0.83	+0.0
5,044,025	-				+0.1
5,044,058	-				+0.1
5,044,107	+				+0.4
5,044,153	+				+0.3
5,044,154	-				+0.3
5,044,172	+				-0.5
5,044,203	+		CA265_RS20405	0.12	-1.7
5,044,204	-		CA265_RS20405	0.13	+0.9
5,044,204	-		CA265_RS20405	0.13	-0.2
5,044,312	+		CA265_RS20405	0.27	+0.2
5,044,312	+		CA265_RS20405	0.27	-0.5
5,044,312	+		CA265_RS20405	0.27	-1.7
5,044,443	+		CA265_RS20405	0.45	-0.3
5,044,446	-		CA265_RS20405	0.46	+0.4
5,044,446	-		CA265_RS20405	0.46	+0.2
5,044,500	+		CA265_RS20405	0.53	-0.1
5,044,500	+		CA265_RS20405	0.53	+0.3
5,044,500	+		CA265_RS20405	0.53	-0.1
5,044,501	-		CA265_RS20405	0.53	-0.2
5,044,504	+		CA265_RS20405	0.54	-0.5
5,044,520	+		CA265_RS20405	0.56	+0.5
5,044,525	+		CA265_RS20405	0.56	-0.2
5,044,600	+		CA265_RS20405	0.67	+1.0
5,044,601	-		CA265_RS20405	0.67	-0.3
5,044,644	+		CA265_RS20405	0.73	-0.6
5,044,645	-		CA265_RS20405	0.73	-0.0
5,044,676	+		CA265_RS20405	0.77	-0.3
5,044,696	+		CA265_RS20405	0.80	-1.1
5,044,730	-		CA265_RS20405	0.84	-0.6
5,044,760	-		CA265_RS20405	0.89	-0.6
5,044,784	+				-0.9
5,044,813	+				+0.3
5,044,813	+				-0.5
5,044,926	+				+0.3
5,044,957	-				+0.1
5,044,970	+				-0.5
5,044,975	-				+0.6
5,044,975	-				-1.2
5,044,977	+				+0.1
5,044,978	-				+0.6
5,044,980	-				-0.9
5,044,980	-				-0.1
5,044,980	-				-0.2
5,045,046	+		CA265_RS20410	0.11	-0.1
5,045,047	-		CA265_RS20410	0.11	+0.3
5,045,100	+		CA265_RS20410	0.16	+0.3
5,045,100	+		CA265_RS20410	0.16	+0.4