Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20390

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
5,041,006	-				+0.2
5,041,008	+				+0.1
5,041,014	-				+0.6
5,041,014	-				+1.6
5,041,033	+				-0.2
5,041,034	-				+0.1
5,041,034	-				-1.7
5,041,035	+				+0.1
5,041,036	-				+0.2
5,041,037	+				+0.3
5,041,038	-				-0.8
5,041,078	+				-0.6
5,041,079	-				-0.8
5,041,166	+		CA265_RS20385	0.14	-0.3
5,041,186	-		CA265_RS20385	0.16	-0.1
5,041,190	+		CA265_RS20385	0.17	-0.2
5,041,195	+		CA265_RS20385	0.18	+1.1
5,041,201	-		CA265_RS20385	0.18	-0.4
5,041,250	+		CA265_RS20385	0.24	-0.5
5,041,266	-		CA265_RS20385	0.26	-0.8
5,041,266	-		CA265_RS20385	0.26	-1.3
5,041,320	+		CA265_RS20385	0.32	+0.2
5,041,349	+		CA265_RS20385	0.36	+0.2
5,041,416	+		CA265_RS20385	0.44	-0.1
5,041,418	+		CA265_RS20385	0.44	-0.3
5,041,418	+		CA265_RS20385	0.44	+0.5
5,041,418	+		CA265_RS20385	0.44	-0.4
5,041,418	+		CA265_RS20385	0.44	+0.7
5,041,493	-		CA265_RS20385	0.53	-1.1
5,041,508	+		CA265_RS20385	0.55	-0.7
5,041,508	-		CA265_RS20385	0.55	-0.0
5,041,679	+		CA265_RS20385	0.75	+1.1
5,041,759	-		CA265_RS20385	0.84	-0.3
5,041,759	-		CA265_RS20385	0.84	-1.6
5,041,761	-		CA265_RS20385	0.85	-0.2
5,041,761	-		CA265_RS20385	0.85	+0.0
5,041,778	+		CA265_RS20385	0.87	-1.4
5,041,785	+		CA265_RS20385	0.88	+0.2
5,041,785	+		CA265_RS20385	0.88	-1.5
5,041,786	-		CA265_RS20385	0.88	-0.9
5,041,786	-		CA265_RS20385	0.88	+3.1
5,041,894	-				-0.3
5,041,959	-				+0.7
5,042,021	+		CA265_RS20390	0.11	+0.1
5,042,027	+		CA265_RS20390	0.12	-0.7
5,042,059	-		CA265_RS20390	0.16	+0.2
5,042,064	+		CA265_RS20390	0.17	+0.1
5,042,064	+		CA265_RS20390	0.17	-1.3
5,042,065	-		CA265_RS20390	0.17	+0.5
5,042,065	-		CA265_RS20390	0.17	-0.7
5,042,091	+		CA265_RS20390	0.20	+1.0
5,042,100	-		CA265_RS20390	0.22	+0.5
5,042,155	+		CA265_RS20390	0.29	+0.4
5,042,174	+		CA265_RS20390	0.31	-0.0
5,042,174	+		CA265_RS20390	0.31	-0.3
5,042,175	-		CA265_RS20390	0.31	-0.1
5,042,389	-		CA265_RS20390	0.60	+0.9
5,042,389	-		CA265_RS20390	0.60	-0.4
5,042,503	+		CA265_RS20390	0.75	+0.5
5,042,504	-		CA265_RS20390	0.75	+0.8
5,042,547	+		CA265_RS20390	0.81	+0.1
5,042,556	-		CA265_RS20390	0.82	+1.0
5,042,560	-		CA265_RS20390	0.83	-0.9
5,042,594	+		CA265_RS20390	0.87	+0.2
5,042,619	-				+0.3
5,042,647	+				+0.3
5,042,681	+				+0.3
5,042,682	-				+0.1
5,042,815	-		CA265_RS20395	0.40	-0.1
5,042,859	-		CA265_RS20395	0.53	-0.6
5,042,870	+		CA265_RS20395	0.56	-1.5
5,042,961	+		CA265_RS20395	0.85	-1.1
5,042,988	-				-0.1
5,042,998	+				+0.1
5,043,179	+				-0.2
5,043,183	-				+1.3
5,043,307	-		CA265_RS20400	0.20	-0.4
5,043,336	-		CA265_RS20400	0.23	+1.0
5,043,336	-		CA265_RS20400	0.23	+0.2
5,043,359	+		CA265_RS20400	0.25	+0.1
5,043,442	-		CA265_RS20400	0.34	-0.2
5,043,443	+		CA265_RS20400	0.34	-0.4
5,043,443	+		CA265_RS20400	0.34	-0.2
5,043,443	+		CA265_RS20400	0.34	-0.7
5,043,443	+		CA265_RS20400	0.34	-0.1
5,043,444	-		CA265_RS20400	0.34	-0.6
5,043,447	+		CA265_RS20400	0.34	-0.9
5,043,447	+		CA265_RS20400	0.34	-0.0
5,043,448	-		CA265_RS20400	0.34	-0.4
5,043,477	-		CA265_RS20400	0.37	-2.1
5,043,682	-		CA265_RS20400	0.57	+0.1
5,043,682	-		CA265_RS20400	0.57	-0.3