Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18500

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
4,600,346	-		CA265_RS18485	0.80	+1.0
4,600,409	+		CA265_RS18485	0.85	+1.1
4,600,409	+		CA265_RS18485	0.85	+2.0
4,600,504	+				+0.2
4,600,505	-				-0.0
4,600,577	-				+1.3
4,600,618	-				-1.5
4,600,688	-		CA265_RS18490	0.16	+0.9
4,600,693	+		CA265_RS18490	0.17	+1.0
4,600,702	+		CA265_RS18490	0.20	+0.6
4,600,723	+		CA265_RS18490	0.26	-1.1
4,600,734	+		CA265_RS18490	0.29	+0.3
4,600,785	+		CA265_RS18490	0.45	+2.0
4,600,824	-		CA265_RS18490	0.56	-0.5
4,600,928	-		CA265_RS18490	0.88	-0.9
4,600,929	+		CA265_RS18490	0.88	+1.4
4,600,929	+		CA265_RS18490	0.88	+0.3
4,600,930	-		CA265_RS18490	0.88	+0.4
4,600,945	-				+0.2
4,600,980	-				+0.5
4,600,982	+				+0.9
4,601,036	+		CA265_RS18495	0.31	+0.5
4,601,060	+		CA265_RS18495	0.41	+1.6
4,601,206	-				-1.0
4,601,211	-				-0.9
4,601,284	+				-0.5
4,601,293	-				+0.8
4,601,366	-		CA265_RS18500	0.13	-1.2
4,601,399	+		CA265_RS18500	0.16	+1.7
4,601,487	+		CA265_RS18500	0.24	+1.0
4,601,525	-		CA265_RS18500	0.28	-0.3
4,601,558	-		CA265_RS18500	0.31	+0.3
4,601,558	-		CA265_RS18500	0.31	+0.3
4,601,619	+		CA265_RS18500	0.36	+0.5
4,601,706	+		CA265_RS18500	0.45	+0.5
4,601,706	+		CA265_RS18500	0.45	+1.9
4,601,708	+		CA265_RS18500	0.45	-0.9
4,601,708	+		CA265_RS18500	0.45	-1.0
4,601,801	-		CA265_RS18500	0.53	+1.3
4,601,948	+		CA265_RS18500	0.67	-0.5
4,601,977	+		CA265_RS18500	0.70	+0.2
4,601,978	-		CA265_RS18500	0.70	+1.1
4,601,998	-		CA265_RS18500	0.72	-0.7
4,601,998	-		CA265_RS18500	0.72	+0.3
4,602,041	+		CA265_RS18500	0.76	+0.5
4,602,072	+		CA265_RS18500	0.79	+1.4
4,602,134	+		CA265_RS18500	0.85	+1.3
4,602,134	+		CA265_RS18500	0.85	+0.3
4,602,228	+				+0.3
4,602,297	+				+1.0
4,602,297	+				-0.1
4,602,297	+				+0.0
4,602,298	-				-0.9
4,602,301	-				-0.9
4,602,317	+				+0.7
4,602,318	-				-2.4
4,602,351	+				+0.0
4,602,430	-				+1.1
4,602,430	-				+0.7
4,602,528	+		CA265_RS18505	0.14	-0.4
4,602,529	-		CA265_RS18505	0.14	-0.7
4,602,529	-		CA265_RS18505	0.14	-1.5
4,602,547	+		CA265_RS18505	0.16	+0.2
4,602,548	-		CA265_RS18505	0.16	+0.1
4,602,552	+		CA265_RS18505	0.17	+1.7
4,602,552	+		CA265_RS18505	0.17	+0.0
4,602,553	-		CA265_RS18505	0.17	+0.0
4,602,553	-		CA265_RS18505	0.17	-0.7
4,602,556	+		CA265_RS18505	0.17	+0.4
4,602,557	-		CA265_RS18505	0.17	-0.7
4,602,586	+		CA265_RS18505	0.21	-0.1
4,602,586	+		CA265_RS18505	0.21	+0.1
4,602,587	-		CA265_RS18505	0.21	-1.8
4,602,661	+		CA265_RS18505	0.30	-0.3
4,602,684	+		CA265_RS18505	0.33	+2.3
4,602,754	+		CA265_RS18505	0.41	-0.4
4,603,006	+		CA265_RS18505	0.73	+0.3
4,603,007	-		CA265_RS18505	0.73	+0.5
4,603,083	-		CA265_RS18505	0.82	-0.8
4,603,102	-		CA265_RS18505	0.84	+0.3
4,603,102	-		CA265_RS18505	0.84	+0.1
4,603,102	-		CA265_RS18505	0.84	-1.2
4,603,104	-		CA265_RS18505	0.85	-0.4
4,603,134	+		CA265_RS18505	0.88	-1.7
4,603,155	-				+0.7
4,603,155	-				-0.4
4,603,186	+				+0.1
4,603,210	+				-0.7
4,603,211	-				-1.2
4,603,267	+				+0.2