Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13225

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
3,287,201	-				-0.5
3,287,390	-		CA265_RS13220	0.25	+0.5
3,287,456	+		CA265_RS13220	0.36	-0.6
3,287,496	+		CA265_RS13220	0.42	+0.5
3,287,523	-		CA265_RS13220	0.47	+0.2
3,287,523	-		CA265_RS13220	0.47	-1.6
3,287,581	-		CA265_RS13220	0.56	-1.1
3,287,581	-		CA265_RS13220	0.56	+0.4
3,287,711	+		CA265_RS13220	0.78	+0.0
3,287,711	+		CA265_RS13220	0.78	+0.6
3,287,767	-		CA265_RS13220	0.87	+0.7
3,287,767	-		CA265_RS13220	0.87	+1.4
3,287,769	+		CA265_RS13220	0.87	-1.0
3,287,770	-		CA265_RS13220	0.87	+0.3
3,287,770	-		CA265_RS13220	0.87	-0.6
3,287,797	-				-0.2
3,287,830	+				+0.4
3,287,831	-				-0.1
3,287,889	-				+0.1
3,287,955	+				+0.2
3,287,981	+				-3.1
3,288,044	+				-0.6
3,288,047	+				+0.9
3,288,078	-				-0.2
3,288,093	+				+0.4
3,288,096	-				+0.6
3,288,173	+				+1.1
3,288,174	-				+0.6
3,288,187	-				+2.1
3,288,326	+		CA265_RS13225	0.22	+0.6
3,288,339	+		CA265_RS13225	0.23	+0.3
3,288,340	+		CA265_RS13225	0.23	-0.4
3,288,442	+		CA265_RS13225	0.34	+0.5
3,288,442	+		CA265_RS13225	0.34	-0.5
3,288,443	-		CA265_RS13225	0.34	+1.0
3,288,451	+		CA265_RS13225	0.35	+0.8
3,288,473	+		CA265_RS13225	0.37	+1.4
3,288,473	+		CA265_RS13225	0.37	+1.1
3,288,489	+		CA265_RS13225	0.39	+0.7
3,288,547	-		CA265_RS13225	0.45	+1.1
3,288,597	+		CA265_RS13225	0.51	+0.6
3,288,606	+		CA265_RS13225	0.52	+0.9
3,288,644	+		CA265_RS13225	0.56	+1.6
3,288,645	-		CA265_RS13225	0.56	+0.1
3,288,645	-		CA265_RS13225	0.56	-0.2
3,288,660	+		CA265_RS13225	0.57	+0.1
3,288,661	-		CA265_RS13225	0.57	+0.9
3,288,714	-		CA265_RS13225	0.63	+0.3
3,288,738	+		CA265_RS13225	0.66	+1.3
3,288,746	+		CA265_RS13225	0.66	+0.9
3,288,749	-		CA265_RS13225	0.67	+1.0
3,288,756	+		CA265_RS13225	0.68	+1.0
3,288,779	+		CA265_RS13225	0.70	+0.9
3,288,780	-		CA265_RS13225	0.70	+1.1
3,288,846	-		CA265_RS13225	0.77	+0.6
3,288,908	+		CA265_RS13225	0.84	+1.0
3,288,914	-		CA265_RS13225	0.84	+0.8
3,289,044	+				+0.6
3,289,089	+				+0.7
3,289,090	-				-0.5
3,289,122	-				+1.4
3,289,885	+		CA265_RS13235	0.19	-0.4
3,289,890	-		CA265_RS13235	0.20	+0.0
3,289,934	-		CA265_RS13235	0.25	+0.0
3,289,934	-		CA265_RS13235	0.25	+0.2
3,289,954	+		CA265_RS13235	0.27	-2.1
3,290,056	+		CA265_RS13235	0.39	-0.3