Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08620

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
2,161,949	-		CA265_RS08615	0.56	-0.7
2,161,953	-		CA265_RS08615	0.56	-0.9
2,161,981	+		CA265_RS08615	0.58	+1.1
2,162,119	+		CA265_RS08615	0.68	-0.1
2,162,120	-		CA265_RS08615	0.68	-0.9
2,162,165	+		CA265_RS08615	0.71	-0.7
2,162,197	+		CA265_RS08615	0.73	+0.3
2,162,198	-		CA265_RS08615	0.73	-0.7
2,162,254	-		CA265_RS08615	0.77	-0.8
2,162,260	+		CA265_RS08615	0.77	-0.3
2,162,294	+		CA265_RS08615	0.79	-0.6
2,162,301	-		CA265_RS08615	0.80	+0.2
2,162,303	+		CA265_RS08615	0.80	-0.4
2,162,359	+		CA265_RS08615	0.84	-0.5
2,162,359	+		CA265_RS08615	0.84	+1.6
2,162,359	+		CA265_RS08615	0.84	-0.0
2,162,376	-		CA265_RS08615	0.85	-0.1
2,162,384	-		CA265_RS08615	0.85	+0.7
2,162,441	+		CA265_RS08615	0.89	-1.4
2,162,441	+		CA265_RS08615	0.89	+0.9
2,162,454	+				-1.0
2,162,455	-				+0.2
2,162,473	+				+0.5
2,162,473	+				+0.3
2,162,473	+				-0.8
2,162,474	-				-0.6
2,162,607	-				+0.9
2,162,611	-				+0.4
2,162,843	+				-0.4
2,162,843	+				-1.1
2,162,872	-				-0.8
2,162,947	-				+0.1
2,162,950	-				+0.0
2,162,968	+				+0.8
2,162,969	-				+0.3
2,162,976	+				-0.9
2,163,109	+		CA265_RS08620	0.25	-0.0
2,163,211	-		CA265_RS08620	0.40	-1.3
2,163,211	-		CA265_RS08620	0.40	-0.4
2,163,256	+		CA265_RS08620	0.46	-0.1
2,163,266	+		CA265_RS08620	0.47	-1.0
2,163,453	-		CA265_RS08620	0.74	-0.9
2,163,477	-		CA265_RS08620	0.77	-0.4
2,163,542	+		CA265_RS08620	0.87	-0.3
2,163,542	+				+1.8
2,163,543	-		CA265_RS08620	0.87	+0.4
2,163,543	-		CA265_RS08620	0.87	+0.6
2,163,581	+				-1.1
2,163,614	+				+0.0
2,163,642	-				-1.0
2,163,677	+				-0.5
2,163,678	-				+0.8
2,163,692	-				+0.8
2,163,745	-				-0.8
2,163,747	-				-0.8
2,163,781	-				-0.3
2,163,910	-		CA265_RS08625	0.16	+0.4
2,163,912	-		CA265_RS08625	0.17	-0.4
2,163,912	-		CA265_RS08625	0.17	-0.4
2,163,985	+		CA265_RS08625	0.21	+0.6
2,163,990	+		CA265_RS08625	0.21	-0.1
2,163,991	-		CA265_RS08625	0.21	+1.1
2,164,022	-		CA265_RS08625	0.23	-0.8
2,164,302	-		CA265_RS08625	0.39	-0.4
2,164,395	+		CA265_RS08625	0.45	+0.0
2,164,443	+		CA265_RS08625	0.48	+0.1
2,164,451	-		CA265_RS08625	0.48	+0.7
2,164,540	+		CA265_RS08625	0.53	+0.3
2,164,541	-		CA265_RS08625	0.53	-0.4
2,164,541	-		CA265_RS08625	0.53	-0.9
2,164,596	+		CA265_RS08625	0.57	+0.9
2,164,598	+		CA265_RS08625	0.57	-0.4
2,164,618	-		CA265_RS08625	0.58	+0.0