Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07440

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
1,880,124	-				-0.4
1,880,184	-				-0.4
1,880,184	-				-0.4
1,880,301	-				+0.7
1,880,400	+				+0.1
1,880,480	+		CA265_RS07435	0.12	+0.5
1,880,480	+		CA265_RS07435	0.12	+1.4
1,880,484	+		CA265_RS07435	0.13	-0.4
1,880,485	-		CA265_RS07435	0.13	+1.3
1,880,485	-		CA265_RS07435	0.13	+1.2
1,880,503	+		CA265_RS07435	0.17	+0.3
1,880,504	-		CA265_RS07435	0.17	-0.3
1,880,504	-		CA265_RS07435	0.17	+0.2
1,880,504	-		CA265_RS07435	0.17	-0.9
1,880,576	-		CA265_RS07435	0.32	+0.1
1,880,576	-		CA265_RS07435	0.32	-0.0
1,880,668	-		CA265_RS07435	0.52	+0.2
1,880,710	+				+0.3
1,880,727	-		CA265_RS07435	0.64	+0.4
1,880,729	+		CA265_RS07435	0.64	-1.1
1,880,730	-		CA265_RS07435	0.65	-0.3
1,880,734	-		CA265_RS07435	0.65	-0.2
1,880,742	-		CA265_RS07435	0.67	+0.8
1,880,810	-		CA265_RS07435	0.81	+0.0
1,880,822	+		CA265_RS07435	0.84	+0.4
1,880,822	+		CA265_RS07435	0.84	-0.1
1,880,913	-				-0.1
1,880,983	+				+0.4
1,881,011	-				-1.1
1,881,029	-				+0.3
1,881,047	+				+0.3
1,881,048	-				-0.0
1,881,054	-				+0.7
1,881,054	-				+0.0
1,881,067	-				-0.5
1,881,110	+		CA265_RS07440	0.10	-1.3
1,881,110	+		CA265_RS07440	0.10	-0.9
1,881,110	+		CA265_RS07440	0.10	-1.0
1,881,111	-		CA265_RS07440	0.10	-0.5
1,881,198	-		CA265_RS07440	0.26	-1.0
1,881,283	+		CA265_RS07440	0.42	-1.1
1,881,360	+		CA265_RS07440	0.56	-2.1
1,881,361	-		CA265_RS07440	0.56	-0.6
1,881,480	+		CA265_RS07440	0.78	-0.3
1,881,565	-				+0.1
1,881,735	+				-0.7
1,881,815	+		CA265_RS07445	0.10	+1.1
1,881,927	+		CA265_RS07445	0.22	-0.0
1,882,047	+		CA265_RS07445	0.35	-0.6
1,882,048	-		CA265_RS07445	0.35	-0.0
1,882,048	-		CA265_RS07445	0.35	+0.3
1,882,068	+		CA265_RS07445	0.37	+0.2
1,882,069	-		CA265_RS07445	0.37	+1.0
1,882,069	-		CA265_RS07445	0.37	+1.1
1,882,126	-		CA265_RS07445	0.43	+0.3
1,882,198	+		CA265_RS07445	0.51	+0.5
1,882,203	+		CA265_RS07445	0.51	+0.5
1,882,203	+		CA265_RS07445	0.51	-1.4
1,882,236	-		CA265_RS07445	0.55	+0.6
1,882,246	-		CA265_RS07445	0.56	-0.1
1,882,356	+		CA265_RS07445	0.67	-0.8
1,882,555	+		CA265_RS07445	0.88	+0.0
1,882,555	+		CA265_RS07445	0.88	+0.3
1,882,593	+				+0.4