Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07255

Experiment: R2A with A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.04 mg/ml
1,816,916	+		CA265_RS07250	0.23	-0.0
1,816,956	+		CA265_RS07250	0.28	-0.6
1,816,972	+		CA265_RS07250	0.29	-0.6
1,816,972	+		CA265_RS07250	0.29	+0.1
1,817,085	-		CA265_RS07250	0.41	+0.1
1,817,118	-				-0.3
1,817,118	-		CA265_RS07250	0.44	-0.9
1,817,188	-		CA265_RS07250	0.52	-0.2
1,817,344	-		CA265_RS07250	0.68	-0.1
1,817,378	+		CA265_RS07250	0.71	+0.4
1,817,472	-		CA265_RS07250	0.81	+0.4
1,817,486	+		CA265_RS07250	0.83	-0.4
1,817,529	-		CA265_RS07250	0.87	-0.2
1,817,680	-				+0.9
1,817,686	+				-2.2
1,817,687	-				-1.5
1,817,795	-				-1.5
1,817,832	+				-3.0
1,817,833	-				-0.9
1,817,854	-				+0.6
1,817,893	+		CA265_RS07255	0.10	+0.5
1,817,987	+		CA265_RS07255	0.24	+0.5
1,817,988	-		CA265_RS07255	0.24	+0.4
1,818,001	-		CA265_RS07255	0.26	-0.8
1,818,008	-		CA265_RS07255	0.27	+0.2
1,818,053	+		CA265_RS07255	0.33	+0.3
1,818,054	-		CA265_RS07255	0.33	-0.0
1,818,057	+		CA265_RS07255	0.34	+0.5
1,818,179	-		CA265_RS07255	0.52	+1.0
1,818,179	-		CA265_RS07255	0.52	+0.2
1,818,182	+		CA265_RS07255	0.52	+1.1
1,818,182	+		CA265_RS07255	0.52	+0.1
1,818,183	-		CA265_RS07255	0.52	+0.3
1,818,183	-		CA265_RS07255	0.52	-0.1
1,818,262	-		CA265_RS07255	0.64	+0.4
1,818,288	-		CA265_RS07255	0.67	+0.1
1,818,328	+		CA265_RS07255	0.73	-0.7
1,818,328	+		CA265_RS07255	0.73	+0.7
1,818,337	+		CA265_RS07255	0.74	+1.1
1,818,379	-		CA265_RS07255	0.81	-0.5
1,818,381	-		CA265_RS07255	0.81	+0.6
1,818,381	-		CA265_RS07255	0.81	+0.1
1,818,430	+		CA265_RS07255	0.88	+1.3
1,818,666	-		CA265_RS07260	0.16	+0.4
1,818,666	-		CA265_RS07260	0.16	+0.0
1,818,724	-		CA265_RS07260	0.22	+0.6
1,818,772	-		CA265_RS07260	0.27	+0.2
1,818,805	+		CA265_RS07260	0.31	-0.3
1,818,941	+		CA265_RS07260	0.45	+0.4
1,818,942	-		CA265_RS07260	0.45	+0.3
1,818,996	+		CA265_RS07260	0.51	-0.2
1,819,007	+		CA265_RS07260	0.52	+0.3
1,819,083	+		CA265_RS07260	0.60	-0.0
1,819,083	+		CA265_RS07260	0.60	+0.1
1,819,083	+		CA265_RS07260	0.60	+0.3
1,819,084	-		CA265_RS07260	0.60	-0.4
1,819,084	-		CA265_RS07260	0.60	-0.1
1,819,131	+		CA265_RS07260	0.65	-0.3
1,819,188	-		CA265_RS07260	0.71	-0.6
1,819,188	-		CA265_RS07260	0.71	-0.2
1,819,241	+		CA265_RS07260	0.76	-1.2
1,819,290	+		CA265_RS07260	0.82	-0.1
1,819,400	+				+0.2
1,819,400	+				+0.1
1,819,444	-				+1.0
1,819,444	-				+1.1