Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_65

Experiment: Chlorite 0.1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_64 and Ac3H11_65 are separated by 163 nucleotidesAc3H11_65 and Ac3H11_66 are separated by 247 nucleotides Ac3H11_64 - Benzoate transport, extracellular ligand-binding receptor, at 65,858 to 67,054 _64 Ac3H11_65 - Chitinase (EC 3.2.1.14), at 67,218 to 68,690 _65 Ac3H11_66 - Benzoate transport, ATPase component, at 68,938 to 69,708 _66 Position (kb) 67 68 69Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 66.281 kb on + strand, within Ac3H11_64at 66.281 kb on + strand, within Ac3H11_64at 66.281 kb on + strand, within Ac3H11_64at 66.281 kb on + strand, within Ac3H11_64at 66.281 kb on + strand, within Ac3H11_64at 66.281 kb on + strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.282 kb on - strand, within Ac3H11_64at 66.452 kb on + strand, within Ac3H11_64at 66.452 kb on + strand, within Ac3H11_64at 66.452 kb on + strand, within Ac3H11_64at 66.452 kb on + strand, within Ac3H11_64at 66.453 kb on - strand, within Ac3H11_64at 66.533 kb on + strand, within Ac3H11_64at 66.534 kb on - strand, within Ac3H11_64at 66.534 kb on - strand, within Ac3H11_64at 66.605 kb on + strand, within Ac3H11_64at 66.605 kb on + strand, within Ac3H11_64at 66.656 kb on + strand, within Ac3H11_64at 66.656 kb on + strand, within Ac3H11_64at 66.656 kb on + strand, within Ac3H11_64at 66.689 kb on + strand, within Ac3H11_64at 66.689 kb on + strand, within Ac3H11_64at 66.690 kb on - strand, within Ac3H11_64at 66.692 kb on + strand, within Ac3H11_64at 66.692 kb on + strand, within Ac3H11_64at 66.692 kb on + strand, within Ac3H11_64at 66.692 kb on + strand, within Ac3H11_64at 66.695 kb on + strand, within Ac3H11_64at 66.695 kb on + strand, within Ac3H11_64at 66.695 kb on + strand, within Ac3H11_64at 66.696 kb on - strand, within Ac3H11_64at 66.696 kb on - strand, within Ac3H11_64at 66.746 kb on + strand, within Ac3H11_64at 66.746 kb on + strand, within Ac3H11_64at 66.746 kb on + strand, within Ac3H11_64at 66.746 kb on + strand, within Ac3H11_64at 66.746 kb on + strand, within Ac3H11_64at 66.747 kb on - strand, within Ac3H11_64at 66.747 kb on - strand, within Ac3H11_64at 66.747 kb on - strand, within Ac3H11_64at 66.747 kb on - strand, within Ac3H11_64at 66.747 kb on - strand, within Ac3H11_64at 66.747 kb on - strand, within Ac3H11_64at 66.747 kb on - strand, within Ac3H11_64at 67.167 kb on - strandat 67.440 kb on + strand, within Ac3H11_65at 67.441 kb on - strand, within Ac3H11_65at 67.590 kb on + strand, within Ac3H11_65at 67.590 kb on + strand, within Ac3H11_65at 67.590 kb on + strand, within Ac3H11_65at 67.591 kb on - strand, within Ac3H11_65at 67.591 kb on - strand, within Ac3H11_65at 67.591 kb on - strand, within Ac3H11_65at 67.653 kb on + strand, within Ac3H11_65at 67.654 kb on - strand, within Ac3H11_65at 67.656 kb on + strand, within Ac3H11_65at 67.656 kb on + strand, within Ac3H11_65at 67.656 kb on + strand, within Ac3H11_65at 67.656 kb on + strand, within Ac3H11_65at 67.656 kb on + strand, within Ac3H11_65at 67.657 kb on - strand, within Ac3H11_65at 67.657 kb on - strand, within Ac3H11_65at 67.657 kb on - strand, within Ac3H11_65at 67.689 kb on + strand, within Ac3H11_65at 67.689 kb on + strand, within Ac3H11_65at 67.735 kb on - strand, within Ac3H11_65at 67.767 kb on + strand, within Ac3H11_65at 67.768 kb on - strand, within Ac3H11_65at 67.818 kb on + strand, within Ac3H11_65at 67.819 kb on - strand, within Ac3H11_65at 67.866 kb on + strand, within Ac3H11_65at 67.866 kb on + strand, within Ac3H11_65at 67.929 kb on + strand, within Ac3H11_65at 67.929 kb on + strand, within Ac3H11_65at 67.930 kb on - strand, within Ac3H11_65at 67.930 kb on - strand, within Ac3H11_65at 67.930 kb on - strand, within Ac3H11_65at 68.028 kb on + strand, within Ac3H11_65at 68.046 kb on + strand, within Ac3H11_65at 68.047 kb on - strand, within Ac3H11_65at 68.047 kb on - strand, within Ac3H11_65at 68.086 kb on - strand, within Ac3H11_65at 68.152 kb on - strand, within Ac3H11_65at 68.152 kb on - strand, within Ac3H11_65at 68.331 kb on + strand, within Ac3H11_65at 68.331 kb on + strand, within Ac3H11_65at 68.331 kb on + strand, within Ac3H11_65at 68.331 kb on + strand, within Ac3H11_65at 68.331 kb on + strand, within Ac3H11_65at 68.331 kb on + strand, within Ac3H11_65at 68.332 kb on - strand, within Ac3H11_65at 68.341 kb on - strand, within Ac3H11_65at 68.341 kb on - strand, within Ac3H11_65at 68.388 kb on + strand, within Ac3H11_65at 68.388 kb on + strand, within Ac3H11_65at 68.389 kb on - strand, within Ac3H11_65at 68.421 kb on + strand, within Ac3H11_65at 68.421 kb on + strand, within Ac3H11_65at 68.421 kb on + strand, within Ac3H11_65at 68.422 kb on - strand, within Ac3H11_65at 68.422 kb on - strand, within Ac3H11_65at 68.422 kb on - strand, within Ac3H11_65at 68.422 kb on - strand, within Ac3H11_65at 68.422 kb on - strand, within Ac3H11_65at 68.422 kb on - strand, within Ac3H11_65at 68.422 kb on - strand, within Ac3H11_65at 68.541 kb on + strand, within Ac3H11_65at 68.541 kb on + strand, within Ac3H11_65at 68.541 kb on + strand, within Ac3H11_65at 68.542 kb on - strand, within Ac3H11_65at 68.589 kb on + strandat 68.589 kb on + strandat 68.589 kb on + strandat 68.590 kb on - strandat 68.590 kb on - strandat 68.667 kb on + strandat 68.668 kb on - strandat 68.668 kb on - strandat 68.668 kb on - strandat 68.668 kb on - strandat 68.668 kb on - strandat 68.670 kb on + strandat 68.671 kb on - strandat 68.671 kb on - strandat 68.693 kb on + strandat 68.693 kb on + strandat 68.693 kb on + strandat 68.693 kb on + strandat 68.694 kb on - strandat 68.694 kb on - strandat 68.694 kb on - strandat 68.697 kb on + strandat 68.697 kb on + strandat 68.697 kb on + strandat 68.697 kb on + strandat 68.697 kb on + strandat 68.697 kb on + strandat 68.698 kb on - strandat 68.698 kb on - strandat 68.698 kb on - strandat 68.698 kb on - strandat 69.070 kb on + strand, within Ac3H11_66at 69.070 kb on + strand, within Ac3H11_66at 69.070 kb on + strand, within Ac3H11_66at 69.071 kb on - strand, within Ac3H11_66at 69.071 kb on - strand, within Ac3H11_66at 69.429 kb on + strand, within Ac3H11_66at 69.430 kb on - strand, within Ac3H11_66at 69.430 kb on - strand, within Ac3H11_66at 69.451 kb on + strand, within Ac3H11_66at 69.451 kb on + strand, within Ac3H11_66at 69.451 kb on + strand, within Ac3H11_66at 69.451 kb on + strand, within Ac3H11_66at 69.451 kb on + strand, within Ac3H11_66at 69.452 kb on - strand, within Ac3H11_66at 69.452 kb on - strand, within Ac3H11_66

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 0.1 mM
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66,281 + Ac3H11_64 0.35 +1.2
66,281 + Ac3H11_64 0.35 -0.5
66,281 + Ac3H11_64 0.35 +1.0
66,281 + Ac3H11_64 0.35 -1.0
66,281 + Ac3H11_64 0.35 +0.9
66,281 + Ac3H11_64 0.35 +0.4
66,282 - Ac3H11_64 0.35 -3.3
66,282 - Ac3H11_64 0.35 +0.0
66,282 - Ac3H11_64 0.35 +0.4
66,282 - Ac3H11_64 0.35 -0.2
66,282 - Ac3H11_64 0.35 -2.7
66,282 - Ac3H11_64 0.35 -2.1
66,282 - Ac3H11_64 0.35 -1.2
66,282 - Ac3H11_64 0.35 -0.8
66,282 - Ac3H11_64 0.35 +0.8
66,452 + Ac3H11_64 0.50 +1.7
66,452 + Ac3H11_64 0.50 -0.2
66,452 + Ac3H11_64 0.50 +2.1
66,452 + Ac3H11_64 0.50 +0.3
66,453 - Ac3H11_64 0.50 +0.1
66,533 + Ac3H11_64 0.56 +1.2
66,534 - Ac3H11_64 0.56 +1.1
66,534 - Ac3H11_64 0.56 +1.1
66,605 + Ac3H11_64 0.62 -1.2
66,605 + Ac3H11_64 0.62 -2.1
66,656 + Ac3H11_64 0.67 -0.8
66,656 + Ac3H11_64 0.67 -0.5
66,656 + Ac3H11_64 0.67 -0.6
66,689 + Ac3H11_64 0.69 +1.0
66,689 + Ac3H11_64 0.69 -1.4
66,690 - Ac3H11_64 0.70 +0.2
66,692 + Ac3H11_64 0.70 -0.4
66,692 + Ac3H11_64 0.70 -2.2
66,692 + Ac3H11_64 0.70 -0.1
66,692 + Ac3H11_64 0.70 -2.7
66,695 + Ac3H11_64 0.70 +1.1
66,695 + Ac3H11_64 0.70 +0.1
66,695 + Ac3H11_64 0.70 -1.2
66,696 - Ac3H11_64 0.70 +0.0
66,696 - Ac3H11_64 0.70 +1.1
66,746 + Ac3H11_64 0.74 -1.9
66,746 + Ac3H11_64 0.74 -0.5
66,746 + Ac3H11_64 0.74 -0.0
66,746 + Ac3H11_64 0.74 +2.5
66,746 + Ac3H11_64 0.74 +0.7
66,747 - Ac3H11_64 0.74 -1.1
66,747 - Ac3H11_64 0.74 +0.1
66,747 - Ac3H11_64 0.74 +0.2
66,747 - Ac3H11_64 0.74 +2.0
66,747 - Ac3H11_64 0.74 -1.1
66,747 - Ac3H11_64 0.74 -1.4
66,747 - Ac3H11_64 0.74 -2.9
67,167 - +2.3
67,440 + Ac3H11_65 0.15 +1.1
67,441 - Ac3H11_65 0.15 -3.4
67,590 + Ac3H11_65 0.25 -0.0
67,590 + Ac3H11_65 0.25 -1.7
67,590 + Ac3H11_65 0.25 -1.7
67,591 - Ac3H11_65 0.25 +0.8
67,591 - Ac3H11_65 0.25 -3.4
67,591 - Ac3H11_65 0.25 -0.7
67,653 + Ac3H11_65 0.30 +0.6
67,654 - Ac3H11_65 0.30 +0.3
67,656 + Ac3H11_65 0.30 +0.1
67,656 + Ac3H11_65 0.30 +0.9
67,656 + Ac3H11_65 0.30 +1.8
67,656 + Ac3H11_65 0.30 -2.4
67,656 + Ac3H11_65 0.30 -1.1
67,657 - Ac3H11_65 0.30 -0.7
67,657 - Ac3H11_65 0.30 -0.2
67,657 - Ac3H11_65 0.30 +0.4
67,689 + Ac3H11_65 0.32 +0.5
67,689 + Ac3H11_65 0.32 -0.2
67,735 - Ac3H11_65 0.35 -1.9
67,767 + Ac3H11_65 0.37 -1.7
67,768 - Ac3H11_65 0.37 +0.4
67,818 + Ac3H11_65 0.41 +0.3
67,819 - Ac3H11_65 0.41 +0.9
67,866 + Ac3H11_65 0.44 -0.3
67,866 + Ac3H11_65 0.44 -0.1
67,929 + Ac3H11_65 0.48 -3.2
67,929 + Ac3H11_65 0.48 +1.4
67,930 - Ac3H11_65 0.48 -0.0
67,930 - Ac3H11_65 0.48 -0.0
67,930 - Ac3H11_65 0.48 -1.9
68,028 + Ac3H11_65 0.55 +2.3
68,046 + Ac3H11_65 0.56 +0.7
68,047 - Ac3H11_65 0.56 +0.3
68,047 - Ac3H11_65 0.56 -0.9
68,086 - Ac3H11_65 0.59 +0.3
68,152 - Ac3H11_65 0.63 +0.8
68,152 - Ac3H11_65 0.63 -0.2
68,331 + Ac3H11_65 0.76 -0.6
68,331 + Ac3H11_65 0.76 +1.1
68,331 + Ac3H11_65 0.76 +0.5
68,331 + Ac3H11_65 0.76 -0.2
68,331 + Ac3H11_65 0.76 -1.0
68,331 + Ac3H11_65 0.76 -3.0
68,332 - Ac3H11_65 0.76 +0.6
68,341 - Ac3H11_65 0.76 +3.4
68,341 - Ac3H11_65 0.76 -1.4
68,388 + Ac3H11_65 0.79 -2.7
68,388 + Ac3H11_65 0.79 +2.0
68,389 - Ac3H11_65 0.79 +1.7
68,421 + Ac3H11_65 0.82 +0.1
68,421 + Ac3H11_65 0.82 +0.9
68,421 + Ac3H11_65 0.82 +0.6
68,422 - Ac3H11_65 0.82 -0.4
68,422 - Ac3H11_65 0.82 +1.3
68,422 - Ac3H11_65 0.82 -1.9
68,422 - Ac3H11_65 0.82 +0.8
68,422 - Ac3H11_65 0.82 +1.4
68,422 - Ac3H11_65 0.82 +0.2
68,422 - Ac3H11_65 0.82 -0.4
68,541 + Ac3H11_65 0.90 +1.4
68,541 + Ac3H11_65 0.90 -1.1
68,541 + Ac3H11_65 0.90 -0.6
68,542 - Ac3H11_65 0.90 +0.9
68,589 + +0.7
68,589 + +0.9
68,589 + -0.4
68,590 - +0.2
68,590 - +0.3
68,667 + -0.7
68,668 - -0.8
68,668 - +0.4
68,668 - +0.7
68,668 - +1.1
68,668 - +1.7
68,670 + +0.3
68,671 - +0.3
68,671 - -3.5
68,693 + +0.8
68,693 + +1.2
68,693 + +0.8
68,693 + -1.0
68,694 - -0.6
68,694 - +1.1
68,694 - -1.1
68,697 + +0.3
68,697 + +1.2
68,697 + -0.6
68,697 + +0.9
68,697 + -0.4
68,697 + +0.7
68,698 - +0.8
68,698 - +0.2
68,698 - -1.4
68,698 - -1.2
69,070 + Ac3H11_66 0.17 +1.4
69,070 + Ac3H11_66 0.17 +1.0
69,070 + Ac3H11_66 0.17 +0.5
69,071 - Ac3H11_66 0.17 -0.2
69,071 - Ac3H11_66 0.17 +1.4
69,429 + Ac3H11_66 0.64 +1.1
69,430 - Ac3H11_66 0.64 -0.5
69,430 - Ac3H11_66 0.64 +2.3
69,451 + Ac3H11_66 0.67 +1.4
69,451 + Ac3H11_66 0.67 +0.6
69,451 + Ac3H11_66 0.67 +0.3
69,451 + Ac3H11_66 0.67 -1.0
69,451 + Ac3H11_66 0.67 -0.2
69,452 - Ac3H11_66 0.67 +0.4
69,452 - Ac3H11_66 0.67 +3.1

Or see this region's nucleotide sequence