Experiment: Chlorite 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4731 and Ac3H11_4732 are separated by 82 nucleotides Ac3H11_4732 and Ac3H11_4733 are separated by 175 nucleotides Ac3H11_4733 and Ac3H11_4734 are separated by 88 nucleotides Ac3H11_4734 and Ac3H11_4735 are separated by 249 nucleotides
Ac3H11_4731 - Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-), at 39,220 to 39,882
_4731
Ac3H11_4732 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16), at 39,965 to 40,705
_4732
Ac3H11_4733 - Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-), at 40,881 to 41,633
_4733
Ac3H11_4734 - hypothetical protein, at 41,722 to 42,270
_4734
Ac3H11_4735 - Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19), at 42,520 to 42,909
_4735
Position (kb) 40
41
42 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 42.017 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.067 kb on + strand, within Ac3H11_4734 at 42.068 kb on - strand, within Ac3H11_4734 at 42.196 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.214 kb on + strand, within Ac3H11_4734 at 42.215 kb on - strand, within Ac3H11_4734 at 42.215 kb on - strand, within Ac3H11_4734 at 42.215 kb on - strand, within Ac3H11_4734 at 42.268 kb on + strand at 42.273 kb on - strand at 42.273 kb on - strand at 42.312 kb on + strand at 42.312 kb on + strand at 42.313 kb on - strand at 42.313 kb on - strand at 42.313 kb on - strand at 42.316 kb on + strand at 42.317 kb on - strand at 42.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.1 mM remove 42,017 + Ac3H11_4734 0.54 +0.8 42,067 + Ac3H11_4734 0.63 +0.3 42,067 + Ac3H11_4734 0.63 +0.5 42,067 + Ac3H11_4734 0.63 -1.4 42,067 + Ac3H11_4734 0.63 -0.7 42,068 - Ac3H11_4734 0.63 +0.2 42,196 + Ac3H11_4734 0.86 +0.4 42,214 + Ac3H11_4734 0.90 -0.2 42,214 + Ac3H11_4734 0.90 +2.2 42,214 + Ac3H11_4734 0.90 +1.2 42,214 + Ac3H11_4734 0.90 -0.0 42,214 + Ac3H11_4734 0.90 +1.3 42,214 + Ac3H11_4734 0.90 +1.8 42,214 + Ac3H11_4734 0.90 +0.1 42,215 - Ac3H11_4734 0.90 +1.1 42,215 - Ac3H11_4734 0.90 -0.4 42,215 - Ac3H11_4734 0.90 +0.8 42,268 + -2.0 42,273 - +0.0 42,273 - +1.2 42,312 + -1.6 42,312 + -0.4 42,313 - -0.7 42,313 - +0.4 42,313 - +0.2 42,316 + +0.7 42,317 - -3.4 42,317 - -1.6
Or see this region's nucleotide sequence