Strain Fitness in Shewanella loihica PV-4 around Shew_3275

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,917,943	-				-1.6
3,918,002	-				+0.2
3,918,143	-				+0.0
3,918,148	+				+0.1
3,918,238	-				-0.2
3,918,299	-		Shew_3275	0.12	-1.2
3,918,305	-		Shew_3275	0.13	-0.2
3,918,394	+		Shew_3275	0.32	-1.2
3,918,811	-				+0.3
3,919,421	+		Shew_3276	0.53	-0.2
3,919,421	+		Shew_3276	0.53	+1.1
3,919,421	+		Shew_3276	0.53	-0.0
3,919,421	+		Shew_3276	0.53	-0.6
3,919,421	+		Shew_3276	0.53	+0.8
3,919,429	-		Shew_3276	0.54	+0.2
3,919,436	+		Shew_3276	0.54	+0.1
3,919,436	+		Shew_3276	0.54	-0.5
3,919,436	+		Shew_3276	0.54	+0.2
3,919,436	+		Shew_3276	0.54	-0.1
3,919,444	-		Shew_3276	0.55	+1.1
3,919,467	+		Shew_3276	0.57	+1.2
3,919,475	-		Shew_3276	0.57	-0.4
3,919,475	-		Shew_3276	0.57	-0.1
3,919,509	-		Shew_3276	0.60	-0.2
3,919,659	-		Shew_3276	0.72	-1.6