Strain Fitness in Shewanella loihica PV-4 around Shew_2813

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
3,332,201	-				+0.4
3,332,203	+				+0.3
3,332,213	-				+0.2
3,332,340	+				-2.9
3,332,359	-				-2.3
3,332,439	+	deoD	Shew_2812	0.21	-3.4
3,332,555	+	deoD	Shew_2812	0.37	-1.5
3,332,718	-	deoD	Shew_2812	0.60	-2.8
3,332,943	+				-3.3
3,332,951	-				-4.5
3,332,992	-				-2.5
3,333,141	+				-0.5
3,333,149	-				-2.9
3,333,261	+		Shew_2813	0.12	-2.8
3,334,148	-		Shew_2813	0.85	-1.5
3,334,981	+	deoA	Shew_2814	0.48	-2.9