Strain Fitness in Shewanella loihica PV-4 around Shew_1769
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,023,763 | + | +0.1 | |||
| 2,023,847 | - | Shew_1768 | 0.50 | -3.4 | |
| 2,023,859 | - | Shew_1768 | 0.58 | +0.4 | |
| 2,023,928 | - | +0.7 | |||
| 2,023,961 | - | +0.0 | |||
| 2,024,168 | + | Shew_1769 | 0.79 | +0.7 | |
| 2,024,322 | + | +0.4 | |||
| 2,024,520 | + | Shew_1770 | 0.12 | -1.5 | |
| 2,024,817 | - | Shew_1770 | 0.24 | -0.1 |
Or see this region's nucleotide sequence