Strain Fitness in Shewanella loihica PV-4 around Shew_1320

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
1,532,223	-		Shew_1319	0.15	-0.3
1,532,489	+		Shew_1319	0.37	+0.1
1,532,520	+		Shew_1319	0.40	-1.8
1,532,535	+		Shew_1319	0.41	-0.2
1,532,623	+		Shew_1319	0.49	-0.1
1,532,736	-		Shew_1319	0.59	-0.8
1,532,736	-		Shew_1319	0.59	+0.8
1,532,736	-		Shew_1319	0.59	+0.5
1,532,736	-		Shew_1319	0.59	-0.8
1,532,752	-		Shew_1319	0.60	-1.0
1,532,762	-		Shew_1319	0.61	+0.2
1,532,802	+		Shew_1319	0.64	-0.9
1,532,810	-		Shew_1319	0.65	-2.1
1,532,810	-		Shew_1319	0.65	-0.4
1,532,924	+		Shew_1319	0.75	-0.9
1,532,924	+		Shew_1319	0.75	-0.2
1,532,924	+		Shew_1319	0.75	-0.1
1,532,932	-		Shew_1319	0.75	-0.0
1,532,932	-		Shew_1319	0.75	-0.5
1,533,159	-				+0.3
1,533,164	-				+0.5
1,533,200	+				-0.1
1,533,200	+				+0.3
1,533,208	-				-1.0
1,533,208	-				+0.3
1,533,350	+		Shew_1320	0.12	-0.1
1,533,360	+		Shew_1320	0.13	+2.0
1,533,416	-		Shew_1320	0.18	-0.2
1,533,416	-		Shew_1320	0.18	+1.9
1,533,426	-		Shew_1320	0.19	-0.2
1,533,469	-		Shew_1320	0.22	+1.2
1,533,573	+		Shew_1320	0.31	+1.2
1,533,605	+		Shew_1320	0.33	-0.3
1,533,774	+		Shew_1320	0.47	-0.1
1,533,838	-		Shew_1320	0.53	+0.2
1,533,838	-		Shew_1320	0.53	-2.5
1,533,838	-		Shew_1320	0.53	+0.8
1,533,996	+		Shew_1320	0.66	+0.3
1,534,055	-		Shew_1320	0.71	+0.7
1,534,096	+		Shew_1320	0.74	-0.4
1,534,682	+		Shew_1321	0.23	+1.0
1,534,682	+		Shew_1321	0.23	-0.1
1,534,764	+		Shew_1321	0.30	-0.4
1,535,002	+		Shew_1321	0.50	+0.3
1,535,045	+		Shew_1321	0.53	+0.4
1,535,120	-		Shew_1321	0.60	+0.5
1,535,134	-		Shew_1321	0.61	-0.1
1,535,385	-		Shew_1321	0.82	+0.2