Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_1217 and Shew_1218 are separated by 306 nucleotides Shew_1218 and Shew_R0026 are separated by 213 nucleotides Shew_R0026 and Shew_R0027 are separated by 21 nucleotides Shew_R0027 and Shew_R0028 are separated by 37 nucleotides Shew_R0028 and Shew_R0029 are separated by 25 nucleotides Shew_R0029 and Shew_R0030 are separated by 53 nucleotides Shew_R0030 and Shew_R0031 are separated by 8 nucleotides Shew_R0031 and Shew_1219 are separated by 529 nucleotides
Shew_1217: Shew_1217 - alanyl-tRNA synthetase (RefSeq), at 1,412,779 to 1,415,403
_1217
Shew_1218: Shew_1218 - carbon storage regulator, CsrA (RefSeq), at 1,415,710 to 1,415,907
_1218
Shew_R0026: Shew_R0026 - tRNA-Ser (RefSeq), at 1,416,121 to 1,416,212
_R0026
Shew_R0027: Shew_R0027 - tRNA-Arg (RefSeq), at 1,416,234 to 1,416,310
_R0027
Shew_R0028: Shew_R0028 - tRNA-Arg (RefSeq), at 1,416,348 to 1,416,424
_R0028
Shew_R0029: Shew_R0029 - tRNA-Arg (RefSeq), at 1,416,450 to 1,416,526
_R0029
Shew_R0030: Shew_R0030 - tRNA-Arg (RefSeq), at 1,416,580 to 1,416,656
_R0030
Shew_R0031: Shew_R0031 - tRNA-Ser (RefSeq), at 1,416,665 to 1,416,756
_R0031
Shew_1219: Shew_1219 - sodium pump decarboxylases, gamma subunit (RefSeq), at 1,417,286 to 1,417,534
_1219
Position (kb)
1416
1417 Strain fitness (log2 ratio)
-1
0
1 at 1415.469 kb on - strand at 1415.924 kb on + strand at 1416.971 kb on + strand
Per-strain Table
Or see this region's nucleotide sequence