Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0773 and Shew_0774 are separated by 206 nucleotides Shew_0774 and Shew_0775 are separated by 144 nucleotides Shew_0775 and Shew_0776 are separated by 99 nucleotides
Shew_0773: Shew_0773 - fructose-1,6-bisphosphatase (RefSeq), at 882,949 to 883,938
_0773
Shew_0774: Shew_0774 - peptidase S9B dipeptidylpeptidase IV subunit (RefSeq), at 884,145 to 886,397
_0774
Shew_0775: Shew_0775 - TetR family transcriptional regulator (RefSeq), at 886,542 to 887,099
_0775
Shew_0776: Shew_0776 - deaminase-reductase domain-containing protein (RefSeq), at 887,199 to 887,735
_0776
Position (kb) 884
885
886
887 Strain fitness (log2 ratio) -1
0
1 at 884.121 kb on - strand at 884.164 kb on + strand at 884.227 kb on - strand at 884.319 kb on - strand at 884.337 kb on + strand at 884.622 kb on - strand, within Shew_0774 at 884.924 kb on + strand, within Shew_0774 at 884.932 kb on - strand, within Shew_0774 at 884.932 kb on - strand, within Shew_0774 at 884.964 kb on - strand, within Shew_0774 at 884.970 kb on - strand, within Shew_0774 at 885.025 kb on - strand, within Shew_0774 at 885.302 kb on + strand, within Shew_0774 at 885.562 kb on - strand, within Shew_0774 at 885.689 kb on + strand, within Shew_0774 at 885.907 kb on + strand, within Shew_0774 at 886.036 kb on - strand, within Shew_0774 at 886.108 kb on - strand, within Shew_0774 at 886.177 kb on - strand at 886.271 kb on + strand at 886.274 kb on - strand at 886.405 kb on + strand at 886.413 kb on - strand at 886.852 kb on + strand, within Shew_0775 at 886.866 kb on - strand, within Shew_0775 at 886.892 kb on + strand, within Shew_0775 at 886.893 kb on + strand, within Shew_0775 at 886.901 kb on - strand, within Shew_0775 at 886.988 kb on + strand, within Shew_0775 at 887.184 kb on + strand at 887.190 kb on - strand at 887.281 kb on - strand, within Shew_0776 at 887.393 kb on + strand, within Shew_0776
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 1 mg/ml remove 884,121 - +0.7 884,164 + +0.3 884,227 - -0.2 884,319 - +0.3 884,337 + +0.1 884,622 - Shew_0774 0.21 +0.9 884,924 + Shew_0774 0.35 +1.1 884,932 - Shew_0774 0.35 +0.6 884,932 - Shew_0774 0.35 -0.7 884,964 - Shew_0774 0.36 +0.2 884,970 - Shew_0774 0.37 +0.2 885,025 - Shew_0774 0.39 -0.3 885,302 + Shew_0774 0.51 +0.9 885,562 - Shew_0774 0.63 +0.3 885,689 + Shew_0774 0.69 -0.2 885,907 + Shew_0774 0.78 +1.3 886,036 - Shew_0774 0.84 +0.0 886,108 - Shew_0774 0.87 +0.3 886,177 - +0.5 886,271 + -0.1 886,274 - +0.4 886,405 + +0.3 886,413 - -0.1 886,852 + Shew_0775 0.56 +0.3 886,866 - Shew_0775 0.58 +0.3 886,892 + Shew_0775 0.63 -0.0 886,893 + Shew_0775 0.63 -0.3 886,901 - Shew_0775 0.64 -0.1 886,988 + Shew_0775 0.80 +0.8 887,184 + -0.2 887,190 - -0.3 887,281 - Shew_0776 0.15 +0.2 887,393 + Shew_0776 0.36 -0.9
Or see this region's nucleotide sequence