Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5435

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
6,242,175	+		Pf6N2E2_5434	0.48	+1.1
6,242,331	+		Pf6N2E2_5434	0.62	-0.4
6,242,332	-		Pf6N2E2_5434	0.62	+1.2
6,242,332	-		Pf6N2E2_5434	0.62	-3.1
6,242,349	+		Pf6N2E2_5434	0.64	-2.1
6,242,380	+		Pf6N2E2_5434	0.67	-1.3
6,242,381	-		Pf6N2E2_5434	0.67	+1.2
6,242,381	-		Pf6N2E2_5434	0.67	+1.0
6,242,430	+		Pf6N2E2_5434	0.71	-0.4
6,242,430	+		Pf6N2E2_5434	0.71	-1.9
6,242,430	+		Pf6N2E2_5434	0.71	+0.6
6,242,431	-		Pf6N2E2_5434	0.71	+0.4
6,242,431	-		Pf6N2E2_5434	0.71	+0.4
6,242,431	-		Pf6N2E2_5434	0.71	-0.1
6,242,431	-		Pf6N2E2_5434	0.71	+0.9
6,242,431	-		Pf6N2E2_5434	0.71	+1.1
6,242,431	-		Pf6N2E2_5434	0.71	-0.2
6,242,431	-		Pf6N2E2_5434	0.71	+0.3
6,242,431	-		Pf6N2E2_5434	0.71	-2.2
6,242,431	-		Pf6N2E2_5434	0.71	+0.4
6,242,431	-		Pf6N2E2_5434	0.71	-0.1
6,242,431	-		Pf6N2E2_5434	0.71	+0.1
6,242,432	+		Pf6N2E2_5434	0.72	+0.6
6,242,432	+		Pf6N2E2_5434	0.72	+0.9
6,242,432	+		Pf6N2E2_5434	0.72	-1.0
6,242,432	+		Pf6N2E2_5434	0.72	+0.1
6,242,433	-		Pf6N2E2_5434	0.72	-0.1
6,242,433	-		Pf6N2E2_5434	0.72	-1.4
6,242,433	-		Pf6N2E2_5434	0.72	-0.3
6,242,433	-		Pf6N2E2_5434	0.72	-0.1
6,242,510	-		Pf6N2E2_5434	0.79	+0.4
6,242,560	+		Pf6N2E2_5434	0.83	+0.3
6,242,561	-		Pf6N2E2_5434	0.83	+0.1
6,242,561	-		Pf6N2E2_5434	0.83	+0.1
6,242,614	-		Pf6N2E2_5434	0.88	-0.2
6,242,629	+		Pf6N2E2_5434	0.90	-3.6
6,242,717	+				+1.7
6,242,728	+				-2.0
6,242,729	-				-0.3
6,242,784	+				-0.8
6,242,784	+				+0.6
6,242,784	+				+1.2
6,242,784	+				+0.4
6,242,784	+				+0.8
6,242,784	+				-0.2
6,242,784	+				+0.8
6,242,784	+				+0.5
6,242,784	+				+0.7
6,242,785	-				+0.3
6,242,785	-				-1.1
6,242,785	-				+0.3
6,242,785	-				-0.0
6,242,785	-				+1.0
6,242,785	-				-0.4
6,242,785	-				+1.0
6,242,785	-				+0.9
6,242,799	+				+0.3
6,242,799	+				-0.9
6,242,799	+				+0.8
6,242,799	+				-0.0
6,242,799	+				+0.7
6,242,800	-				-0.1
6,242,800	-				-3.9
6,242,800	-				-0.2
6,242,800	-				+0.6
6,242,800	-				+1.1
6,242,824	+				-0.3
6,242,869	-				+1.0
6,242,883	-				+0.2
6,242,913	+				-1.1
6,242,913	+				+1.0
6,242,913	+				+0.0
6,242,913	+				-0.9
6,242,914	-				+0.2
6,242,914	-				+0.4
6,242,914	-				+1.7
6,242,914	-				+1.0
6,242,957	-				-0.8
6,243,057	-				-0.6
6,243,124	+				-3.3
6,243,124	+				+0.3
6,243,125	-				+0.4
6,243,125	-				-0.3
6,243,360	-		Pf6N2E2_5435	0.54	-3.1
6,243,437	+		Pf6N2E2_5435	0.69	-3.5
6,243,438	-		Pf6N2E2_5435	0.69	-0.6
6,243,438	-		Pf6N2E2_5435	0.69	-0.3
6,243,524	+		Pf6N2E2_5435	0.86	-1.5
6,243,524	+		Pf6N2E2_5435	0.86	-1.2
6,243,524	+		Pf6N2E2_5435	0.86	-1.1
6,243,524	+		Pf6N2E2_5435	0.86	-1.5
6,243,524	+		Pf6N2E2_5435	0.86	-0.7
6,243,525	-		Pf6N2E2_5435	0.86	-3.7
6,243,525	-		Pf6N2E2_5435	0.86	-2.2
6,243,525	-		Pf6N2E2_5435	0.86	-3.3
6,243,624	+				-2.6
6,243,625	-				+1.7
6,243,625	-				-3.8
6,243,627	+				-0.2
6,243,628	-				+0.5
6,243,639	+				-0.6
6,243,639	+				+1.0
6,243,640	-				-3.6
6,243,643	+				-2.5
6,243,644	-				-2.2
6,243,644	-				-0.5
6,243,644	-				+0.8
6,243,691	-				+0.5
6,243,691	-				-0.2
6,243,691	-				-0.4
6,243,715	-		Pf6N2E2_5436	0.14	-0.8
6,243,715	-		Pf6N2E2_5436	0.14	-1.0
6,243,769	+		Pf6N2E2_5436	0.24	-1.8
6,243,851	+		Pf6N2E2_5436	0.39	-1.1
6,243,851	+		Pf6N2E2_5436	0.39	+1.1
6,243,851	+		Pf6N2E2_5436	0.39	+0.4
6,243,851	+		Pf6N2E2_5436	0.39	-0.2
6,243,851	+		Pf6N2E2_5436	0.39	+0.7
6,243,851	+		Pf6N2E2_5436	0.39	+0.1
6,243,851	+		Pf6N2E2_5436	0.39	+0.0
6,243,851	+		Pf6N2E2_5436	0.39	-0.1
6,243,851	+		Pf6N2E2_5436	0.39	-0.2
6,243,851	+		Pf6N2E2_5436	0.39	+1.0
6,243,852	-		Pf6N2E2_5436	0.39	-1.6
6,243,852	-		Pf6N2E2_5436	0.39	+0.1
6,243,852	-		Pf6N2E2_5436	0.39	+1.6
6,243,852	-		Pf6N2E2_5436	0.39	-1.2
6,243,852	-		Pf6N2E2_5436	0.39	-3.9
6,243,852	-		Pf6N2E2_5436	0.39	-0.3
6,243,852	-		Pf6N2E2_5436	0.39	+0.9
6,243,857	+		Pf6N2E2_5436	0.40	-0.3
6,243,857	+		Pf6N2E2_5436	0.40	+1.6
6,243,857	+		Pf6N2E2_5436	0.40	+0.8
6,243,857	+		Pf6N2E2_5436	0.40	+0.2
6,243,858	-		Pf6N2E2_5436	0.40	-1.3
6,243,868	+		Pf6N2E2_5436	0.42	-1.5
6,243,869	-		Pf6N2E2_5436	0.42	-0.6
6,243,889	+		Pf6N2E2_5436	0.45	+1.3
6,243,889	+		Pf6N2E2_5436	0.45	+1.2
6,243,889	+		Pf6N2E2_5436	0.45	-0.9
6,243,890	-		Pf6N2E2_5436	0.46	-1.6
6,243,891	+		Pf6N2E2_5436	0.46	+1.0
6,243,891	+		Pf6N2E2_5436	0.46	-0.1
6,243,891	+		Pf6N2E2_5436	0.46	+0.5
6,243,891	+		Pf6N2E2_5436	0.46	-1.6
6,243,891	+		Pf6N2E2_5436	0.46	+0.6
6,243,891	+		Pf6N2E2_5436	0.46	+0.9
6,243,891	+		Pf6N2E2_5436	0.46	+0.3
6,243,891	+		Pf6N2E2_5436	0.46	-0.2
6,243,891	+		Pf6N2E2_5436	0.46	-0.9
6,243,891	+		Pf6N2E2_5436	0.46	+1.6
6,243,891	+		Pf6N2E2_5436	0.46	-0.8
6,243,891	+		Pf6N2E2_5436	0.46	-2.1
6,243,891	+		Pf6N2E2_5436	0.46	+0.5
6,243,891	+		Pf6N2E2_5436	0.46	-1.1
6,243,892	-		Pf6N2E2_5436	0.46	+1.1
6,243,892	-		Pf6N2E2_5436	0.46	-0.6
6,243,892	-		Pf6N2E2_5436	0.46	+1.0
6,243,892	-		Pf6N2E2_5436	0.46	+1.3
6,243,892	-		Pf6N2E2_5436	0.46	+0.2
6,243,892	-		Pf6N2E2_5436	0.46	+0.8
6,243,892	-		Pf6N2E2_5436	0.46	+0.3
6,243,999	+		Pf6N2E2_5436	0.65	+0.7
6,244,043	-		Pf6N2E2_5436	0.73	-0.3
6,244,319	+				-1.3
6,244,348	+				-0.8
6,244,348	+				+0.1
6,244,360	+				-0.4
6,244,361	-				-0.7
6,244,361	-				-0.6
6,244,361	-				-2.2
6,244,364	+				-0.4
6,244,364	+				+0.6
6,244,364	+				-2.5
6,244,364	+				+0.6
6,244,364	+				-2.2
6,244,365	-				-0.0
6,244,370	+				-3.9
6,244,370	+				-1.0