Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4909

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
5,665,139	+		Pf6N2E2_4908	0.47	-0.5
5,665,140	-		Pf6N2E2_4908	0.47	+0.9
5,665,140	-		Pf6N2E2_4908	0.47	-0.5
5,665,169	+		Pf6N2E2_4908	0.50	+1.5
5,665,169	+		Pf6N2E2_4908	0.50	-1.1
5,665,169	+		Pf6N2E2_4908	0.50	+0.5
5,665,169	+		Pf6N2E2_4908	0.50	+1.2
5,665,170	-		Pf6N2E2_4908	0.50	-0.3
5,665,170	-		Pf6N2E2_4908	0.50	+0.5
5,665,181	+		Pf6N2E2_4908	0.51	-0.8
5,665,182	-		Pf6N2E2_4908	0.51	-2.1
5,665,232	+		Pf6N2E2_4908	0.57	+0.1
5,665,232	+		Pf6N2E2_4908	0.57	+1.7
5,665,232	+		Pf6N2E2_4908	0.57	-1.2
5,665,232	+		Pf6N2E2_4908	0.57	+0.3
5,665,232	+		Pf6N2E2_4908	0.57	+0.3
5,665,233	-		Pf6N2E2_4908	0.57	-0.4
5,665,355	+		Pf6N2E2_4908	0.70	+1.7
5,665,508	+		Pf6N2E2_4908	0.86	-0.3
5,665,509	-		Pf6N2E2_4908	0.87	-0.9
5,665,735	+				+0.8
5,665,736	-				+0.4
5,665,736	-				-0.7
5,665,818	-				+0.2
5,665,826	+				+1.7
5,665,827	-				+1.2
5,665,844	+				+0.3
5,665,844	+				-2.4
5,665,844	+				+0.5
5,665,845	-				-0.0
5,665,845	-				+0.8
5,665,845	-				+1.1
5,665,845	-				+1.0
5,665,845	-				-0.1
5,665,845	-				+1.7
5,665,845	-				-0.0
5,665,845	-				+2.4
5,665,914	-		Pf6N2E2_4909	0.14	+2.4
5,665,914	-		Pf6N2E2_4909	0.14	+0.4
5,665,914	-		Pf6N2E2_4909	0.14	-0.5
5,665,938	-		Pf6N2E2_4909	0.17	+1.9
5,665,979	+		Pf6N2E2_4909	0.23	+1.2
5,665,980	-		Pf6N2E2_4909	0.23	+1.4
5,666,076	-		Pf6N2E2_4909	0.37	+1.1
5,666,087	+		Pf6N2E2_4909	0.39	+1.3
5,666,087	+		Pf6N2E2_4909	0.39	-0.5
5,666,087	+		Pf6N2E2_4909	0.39	+1.5
5,666,087	+		Pf6N2E2_4909	0.39	+1.4
5,666,087	+		Pf6N2E2_4909	0.39	+1.5
5,666,088	-		Pf6N2E2_4909	0.39	+0.3
5,666,088	-		Pf6N2E2_4909	0.39	+1.9
5,666,088	-		Pf6N2E2_4909	0.39	+2.0
5,666,088	-		Pf6N2E2_4909	0.39	+1.8
5,666,108	+		Pf6N2E2_4909	0.42	-1.7
5,666,108	+		Pf6N2E2_4909	0.42	+2.4
5,666,108	+		Pf6N2E2_4909	0.42	+0.9
5,666,108	+		Pf6N2E2_4909	0.42	-0.4
5,666,108	+		Pf6N2E2_4909	0.42	+0.1
5,666,109	-		Pf6N2E2_4909	0.42	+1.6
5,666,109	-		Pf6N2E2_4909	0.42	+1.5
5,666,109	-				+1.7
5,666,109	-		Pf6N2E2_4909	0.42	+3.0
5,666,109	-		Pf6N2E2_4909	0.42	+0.9
5,666,109	-		Pf6N2E2_4909	0.42	+1.3
5,666,109	-		Pf6N2E2_4909	0.42	+0.5
5,666,109	-		Pf6N2E2_4909	0.42	+0.5
5,666,109	-		Pf6N2E2_4909	0.42	+1.1
5,666,109	-		Pf6N2E2_4909	0.42	+0.4
5,666,109	-		Pf6N2E2_4909	0.42	+1.2
5,666,144	+		Pf6N2E2_4909	0.47	+0.4
5,666,145	-		Pf6N2E2_4909	0.47	+1.8
5,666,145	-		Pf6N2E2_4909	0.47	+0.9
5,666,145	-		Pf6N2E2_4909	0.47	+0.4
5,666,288	+		Pf6N2E2_4909	0.68	+1.3
5,666,288	+		Pf6N2E2_4909	0.68	+0.5
5,666,288	+		Pf6N2E2_4909	0.68	+2.1
5,666,289	-		Pf6N2E2_4909	0.68	-0.2
5,666,289	-		Pf6N2E2_4909	0.68	+1.8
5,666,289	-		Pf6N2E2_4909	0.68	+1.3
5,666,320	-		Pf6N2E2_4909	0.72	-1.0
5,666,434	-		Pf6N2E2_4909	0.88	+1.0
5,666,434	-		Pf6N2E2_4909	0.88	+0.5
5,666,554	-				+1.2
5,666,607	+				+0.4
5,666,608	-				+0.6
5,666,608	-				-0.7
5,666,741	+				+0.8
5,666,741	+				+1.4
5,666,741	+				-1.6
5,666,741	+				-2.3
5,666,742	-				-0.1
5,666,742	-				-0.2
5,666,742	-				+0.1
5,666,745	+				+1.3
5,666,745	+				-0.2
5,666,745	+				-0.5
5,666,746	-				-1.0
5,666,746	-				+1.2
5,666,746	-				+0.2
5,666,746	-				+1.6
5,666,746	-				+1.3
5,666,746	-				+0.9
5,666,746	-				+0.1
5,666,746	-				+1.1
5,666,746	-				-1.7
5,666,746	-				+0.2
5,666,746	-				+0.0
5,666,746	-				+1.0
5,666,746	-				-0.1
5,666,791	+				+0.4
5,666,791	+				-1.4
5,666,791	+				+0.5
5,666,791	+				+0.7
5,666,792	-				+1.4
5,666,792	-				-1.1
5,666,792	-				+0.5
5,666,792	-				+0.8
5,666,792	-				+0.1
5,666,792	-				+2.1
5,666,797	+				-0.2
5,666,797	+				+0.8
5,666,797	+				-1.4
5,666,797	+				-1.6
5,666,797	+				+0.8
5,666,797	+				+0.4
5,666,797	+				+0.1
5,666,797	+				-0.3
5,666,797	+				+0.9
5,666,797	+				+0.3
5,666,797	+				+0.3
5,666,797	+				-1.0
5,666,797	+				+0.4
5,666,797	+				-0.1
5,666,798	-				-0.1
5,666,798	-				+0.7
5,666,798	-				-0.6
5,666,798	-				-0.3
5,666,798	-				-1.4
5,666,798	-				+0.3
5,666,798	-				+0.5
5,666,798	-				+0.8
5,666,798	-				+1.8
5,666,881	+		Pf6N2E2_4910	0.20	-0.7
5,666,890	+		Pf6N2E2_4910	0.22	+0.8
5,666,890	+		Pf6N2E2_4910	0.22	-0.1
5,666,890	+		Pf6N2E2_4910	0.22	+0.7
5,666,891	-		Pf6N2E2_4910	0.22	-2.7
5,666,891	-		Pf6N2E2_4910	0.22	-1.0
5,666,891	-		Pf6N2E2_4910	0.22	+1.0
5,666,891	-		Pf6N2E2_4910	0.22	+0.3
5,666,958	+		Pf6N2E2_4910	0.35	+0.3
5,666,958	+		Pf6N2E2_4910	0.35	+0.6
5,666,966	+		Pf6N2E2_4910	0.37	+1.0
5,666,967	-		Pf6N2E2_4910	0.37	+0.7
5,666,980	+		Pf6N2E2_4910	0.39	+0.2
5,666,980	+		Pf6N2E2_4910	0.39	+1.4
5,666,981	-		Pf6N2E2_4910	0.40	+0.4
5,666,981	-		Pf6N2E2_4910	0.40	+0.7
5,667,038	+		Pf6N2E2_4910	0.51	+0.1
5,667,040	+		Pf6N2E2_4910	0.51	+0.2
5,667,040	+		Pf6N2E2_4910	0.51	+1.1
5,667,040	+		Pf6N2E2_4910	0.51	-1.3
5,667,041	-		Pf6N2E2_4910	0.51	-0.5
5,667,309	-				+0.6
5,667,309	-				-0.4
5,667,309	-				-0.0
5,667,417	+				+0.3
5,667,418	-				+1.3
5,667,418	-				+0.8
5,667,444	+		Pf6N2E2_4911	0.11	-0.2
5,667,444	+		Pf6N2E2_4911	0.11	+0.6
5,667,444	+		Pf6N2E2_4911	0.11	+2.2
5,667,444	+		Pf6N2E2_4911	0.11	+0.9
5,667,445	-		Pf6N2E2_4911	0.11	+1.1
5,667,453	+		Pf6N2E2_4911	0.12	+0.8
5,667,453	+		Pf6N2E2_4911	0.12	-0.7
5,667,454	-		Pf6N2E2_4911	0.12	+0.1
5,667,468	+		Pf6N2E2_4911	0.13	+0.5
5,667,468	+		Pf6N2E2_4911	0.13	-1.1
5,667,468	+		Pf6N2E2_4911	0.13	+0.6
5,667,468	+		Pf6N2E2_4911	0.13	+0.1
5,667,469	-		Pf6N2E2_4911	0.13	+0.5
5,667,495	+		Pf6N2E2_4911	0.15	-0.0
5,667,495	+		Pf6N2E2_4911	0.15	+0.6
5,667,495	+		Pf6N2E2_4911	0.15	-0.8
5,667,495	+		Pf6N2E2_4911	0.15	+0.2
5,667,495	+		Pf6N2E2_4911	0.15	+0.9
5,667,495	+		Pf6N2E2_4911	0.15	+1.2
5,667,495	+		Pf6N2E2_4911	0.15	+0.6
5,667,496	-		Pf6N2E2_4911	0.15	-1.9
5,667,496	-		Pf6N2E2_4911	0.15	-1.9
5,667,496	-		Pf6N2E2_4911	0.15	-0.5
5,667,496	-		Pf6N2E2_4911	0.15	+1.4
5,667,496	-		Pf6N2E2_4911	0.15	+0.4