Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4769

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
5,507,998	+		Pf6N2E2_4768	0.61	+0.6
5,507,998	+		Pf6N2E2_4768	0.61	+1.3
5,507,998	+		Pf6N2E2_4768	0.61	-1.7
5,508,223	+		Pf6N2E2_4768	0.73	+1.0
5,508,223	+		Pf6N2E2_4768	0.73	+0.8
5,508,223	+				+1.3
5,508,223	+		Pf6N2E2_4768	0.73	+1.3
5,508,223	+		Pf6N2E2_4768	0.73	+0.2
5,508,223	+		Pf6N2E2_4768	0.73	+0.9
5,508,223	+		Pf6N2E2_4768	0.73	-0.4
5,508,223	+		Pf6N2E2_4768	0.73	+1.0
5,508,223	+		Pf6N2E2_4768	0.73	+2.1
5,508,224	-		Pf6N2E2_4768	0.73	-0.5
5,508,224	-		Pf6N2E2_4768	0.73	+0.2
5,508,224	-		Pf6N2E2_4768	0.73	-0.6
5,508,224	-		Pf6N2E2_4768	0.73	-0.3
5,508,224	-		Pf6N2E2_4768	0.73	-0.3
5,508,224	-		Pf6N2E2_4768	0.73	+1.0
5,508,224	-		Pf6N2E2_4768	0.73	+0.7
5,508,224	-		Pf6N2E2_4768	0.73	-0.5
5,508,257	+		Pf6N2E2_4768	0.75	+0.1
5,508,257	+		Pf6N2E2_4768	0.75	+0.9
5,508,257	+		Pf6N2E2_4768	0.75	-0.7
5,508,258	-		Pf6N2E2_4768	0.75	-0.9
5,508,258	-		Pf6N2E2_4768	0.75	+0.3
5,508,321	+		Pf6N2E2_4768	0.79	+0.4
5,508,321	+		Pf6N2E2_4768	0.79	+0.9
5,508,321	+		Pf6N2E2_4768	0.79	+1.6
5,508,322	-		Pf6N2E2_4768	0.79	-0.2
5,508,322	-		Pf6N2E2_4768	0.79	-2.9
5,508,322	-		Pf6N2E2_4768	0.79	-0.6
5,508,364	+		Pf6N2E2_4768	0.81	+0.3
5,508,364	+		Pf6N2E2_4768	0.81	+2.2
5,508,364	+		Pf6N2E2_4768	0.81	+1.6
5,508,364	+		Pf6N2E2_4768	0.81	+1.7
5,508,365	-		Pf6N2E2_4768	0.81	+1.0
5,508,472	+		Pf6N2E2_4768	0.87	-0.0
5,508,472	+		Pf6N2E2_4768	0.87	-0.5
5,508,472	+		Pf6N2E2_4768	0.87	-1.7
5,508,481	+		Pf6N2E2_4768	0.87	+1.1
5,508,481	+		Pf6N2E2_4768	0.87	+0.4
5,508,490	+		Pf6N2E2_4768	0.88	+1.5
5,508,490	+		Pf6N2E2_4768	0.88	+0.8
5,508,491	-		Pf6N2E2_4768	0.88	+0.5
5,508,491	-		Pf6N2E2_4768	0.88	-0.4
5,508,491	-		Pf6N2E2_4768	0.88	-0.4
5,508,505	+		Pf6N2E2_4768	0.89	+1.2
5,508,505	+		Pf6N2E2_4768	0.89	+1.3
5,508,506	-		Pf6N2E2_4768	0.89	-1.3
5,508,506	-		Pf6N2E2_4768	0.89	-0.6
5,508,506	-		Pf6N2E2_4768	0.89	-0.4
5,508,604	+				+1.1
5,508,604	+				+1.9
5,508,604	+				-0.5
5,508,605	-				-0.0
5,508,628	-				-2.7
5,508,628	-				-0.5
5,508,821	-				-0.4
5,508,902	+				+1.9
5,508,903	-				-4.4
5,508,903	-				-2.6
5,508,903	-				-2.9
5,508,932	+				-2.2
5,508,932	+				-3.3
5,508,932	+				-2.9
5,508,961	+				-5.1
5,508,962	-				-2.5
5,509,201	+		Pf6N2E2_4769	0.14	-3.0
5,509,201	+		Pf6N2E2_4769	0.14	-4.7
5,509,201	+		Pf6N2E2_4769	0.14	-4.1
5,509,202	-		Pf6N2E2_4769	0.14	-3.8
5,509,202	-		Pf6N2E2_4769	0.14	-4.7
5,509,210	+		Pf6N2E2_4769	0.15	-1.6
5,509,210	+		Pf6N2E2_4769	0.15	-3.3
5,509,210	+		Pf6N2E2_4769	0.15	-3.1
5,509,210	+		Pf6N2E2_4769	0.15	-3.1
5,509,210	+		Pf6N2E2_4769	0.15	-3.6
5,509,252	+		Pf6N2E2_4769	0.17	-4.3
5,509,402	+		Pf6N2E2_4769	0.25	-4.1
5,509,403	-		Pf6N2E2_4769	0.25	-4.3
5,509,417	+		Pf6N2E2_4769	0.26	-2.6
5,509,418	-		Pf6N2E2_4769	0.26	-4.3
5,509,418	-		Pf6N2E2_4769	0.26	-4.0
5,509,418	-		Pf6N2E2_4769	0.26	-0.2
5,509,418	-		Pf6N2E2_4769	0.26	-0.7
5,509,418	-		Pf6N2E2_4769	0.26	-2.8
5,509,418	-		Pf6N2E2_4769	0.26	-3.3
5,509,418	-		Pf6N2E2_4769	0.26	-2.5
5,509,418	-		Pf6N2E2_4769	0.26	-1.5
5,509,418	-		Pf6N2E2_4769	0.26	-2.2
5,509,519	+		Pf6N2E2_4769	0.32	-2.8
5,509,519	+		Pf6N2E2_4769	0.32	-0.3
5,509,519	+		Pf6N2E2_4769	0.32	-2.0
5,509,519	+		Pf6N2E2_4769	0.32	-3.6
5,509,519	+		Pf6N2E2_4769	0.32	-3.5
5,509,519	+		Pf6N2E2_4769	0.32	+0.3
5,509,520	-		Pf6N2E2_4769	0.32	-4.7
5,509,520	-		Pf6N2E2_4769	0.32	-3.1
5,509,520	-		Pf6N2E2_4769	0.32	-4.2
5,509,520	-		Pf6N2E2_4769	0.32	-3.6
5,509,520	-		Pf6N2E2_4769	0.32	-4.0
5,509,780	+		Pf6N2E2_4769	0.47	-2.9
5,509,834	+		Pf6N2E2_4769	0.50	-0.3
5,509,834	+		Pf6N2E2_4769	0.50	-1.1
5,509,834	+		Pf6N2E2_4769	0.50	-3.6
5,509,835	-		Pf6N2E2_4769	0.50	-4.1
5,509,835	-		Pf6N2E2_4769	0.50	-3.5
5,509,835	-		Pf6N2E2_4769	0.50	-3.8
5,509,835	-		Pf6N2E2_4769	0.50	-2.5
5,509,835	-		Pf6N2E2_4769	0.50	-2.2
5,509,903	+		Pf6N2E2_4769	0.53	-3.0
5,510,050	+		Pf6N2E2_4769	0.62	-3.5
5,510,050	+		Pf6N2E2_4769	0.62	-4.1
5,510,050	+		Pf6N2E2_4769	0.62	-0.5
5,510,050	+		Pf6N2E2_4769	0.62	-3.6
5,510,051	-		Pf6N2E2_4769	0.62	-4.3
5,510,215	+		Pf6N2E2_4769	0.71	-3.9
5,510,216	-		Pf6N2E2_4769	0.71	-3.9
5,510,216	-		Pf6N2E2_4769	0.71	-3.0
5,510,216	-		Pf6N2E2_4769	0.71	-3.7
5,510,216	-		Pf6N2E2_4769	0.71	-4.4
5,510,216	-		Pf6N2E2_4769	0.71	-3.6
5,510,272	+		Pf6N2E2_4769	0.74	-3.0
5,510,272	+		Pf6N2E2_4769	0.74	+0.0
5,510,272	+		Pf6N2E2_4769	0.74	-4.6
5,510,272	+		Pf6N2E2_4769	0.74	-3.2
5,510,273	-		Pf6N2E2_4769	0.74	-6.1
5,510,273	-		Pf6N2E2_4769	0.74	-5.0
5,510,273	-		Pf6N2E2_4769	0.74	-1.0
5,510,273	-		Pf6N2E2_4769	0.74	-2.7
5,510,273	-		Pf6N2E2_4769	0.74	-2.7
5,510,273	-		Pf6N2E2_4769	0.74	-3.3
5,510,273	-		Pf6N2E2_4769	0.74	+1.3
5,510,289	+		Pf6N2E2_4769	0.75	-3.6
5,510,345	-		Pf6N2E2_4769	0.78	-4.1
5,510,345	-		Pf6N2E2_4769	0.78	-3.5
5,510,515	+		Pf6N2E2_4769	0.88	-3.1
5,510,515	+		Pf6N2E2_4769	0.88	-3.9
5,510,515	+		Pf6N2E2_4769	0.88	-3.8
5,510,515	+		Pf6N2E2_4769	0.88	-4.0
5,510,516	-		Pf6N2E2_4769	0.88	-3.3
5,510,516	-		Pf6N2E2_4769	0.88	-5.2
5,510,542	+		Pf6N2E2_4769	0.89	-3.4
5,510,543	-		Pf6N2E2_4769	0.89	-2.4
5,510,543	-		Pf6N2E2_4769	0.89	-4.7
5,510,548	+		Pf6N2E2_4769	0.90	-2.5
5,510,548	+		Pf6N2E2_4769	0.90	-4.5
5,510,548	+		Pf6N2E2_4769	0.90	-1.8
5,510,548	+		Pf6N2E2_4769	0.90	-3.3
5,510,548	+		Pf6N2E2_4769	0.90	-3.1
5,510,548	+		Pf6N2E2_4769	0.90	-2.6
5,510,548	+		Pf6N2E2_4769	0.90	-3.8
5,510,548	+		Pf6N2E2_4769	0.90	-3.2
5,510,548	+		Pf6N2E2_4769	0.90	-1.3
5,510,548	+		Pf6N2E2_4769	0.90	-4.1
5,510,548	+		Pf6N2E2_4769	0.90	-4.4
5,510,548	+		Pf6N2E2_4769	0.90	-3.6
5,510,548	+		Pf6N2E2_4769	0.90	-3.2
5,510,548	+		Pf6N2E2_4769	0.90	-3.4
5,510,548	+		Pf6N2E2_4769	0.90	-2.1
5,510,548	+		Pf6N2E2_4769	0.90	-3.8
5,510,549	-		Pf6N2E2_4769	0.90	-1.4
5,510,549	-				+1.3
5,510,549	-		Pf6N2E2_4769	0.90	-3.1
5,510,549	-		Pf6N2E2_4769	0.90	-3.6
5,510,549	-		Pf6N2E2_4769	0.90	-3.2
5,510,549	-		Pf6N2E2_4769	0.90	-3.6
5,510,549	-		Pf6N2E2_4769	0.90	-4.2
5,510,549	-		Pf6N2E2_4769	0.90	-2.7
5,510,549	-		Pf6N2E2_4769	0.90	-4.5
5,510,549	-		Pf6N2E2_4769	0.90	-4.4
5,510,549	-		Pf6N2E2_4769	0.90	-4.8
5,510,549	-		Pf6N2E2_4769	0.90	+0.3
5,510,549	-		Pf6N2E2_4769	0.90	-3.3
5,510,549	-		Pf6N2E2_4769	0.90	-3.0
5,510,606	-				-4.2
5,510,635	+				-1.3
5,510,635	+				-3.1
5,510,635	+				-4.9
5,510,635	+				-3.7
5,510,636	-				-3.1
5,510,636	-				-3.2
5,510,659	-				-2.8
5,510,728	+				-0.8
5,510,728	+				-0.1
5,510,728	+				-2.8
5,510,757	+				-1.1
5,510,757	+				-1.6
5,510,806	+				+0.3
5,510,807	-				+0.0
5,510,811	+				+0.7
5,510,811	+				-4.3
5,510,811	+				+0.0
5,510,811	+				-1.0
5,510,811	+				-0.5
5,510,811	+				-1.2
5,510,812	-				-0.3
5,510,812	-				-2.2
5,510,812	-				-1.3
5,510,812	-				-0.4
5,510,812	-				+0.0
5,510,846	+				-0.9
5,510,862	+				+0.9
5,510,862	+				-0.2
5,510,862	+				-0.2
5,510,862	+				-0.5
5,510,862	+				-2.1
5,510,863	-				-2.0
5,510,863	-				-2.2
5,510,863	-				-3.4
5,511,037	+				-0.8
5,511,037	+				-2.4
5,511,037	+				+1.2
5,511,037	+				-1.6
5,511,037	+				-0.2
5,511,037	+				+0.6
5,511,037	+				-0.4
5,511,037	+				+0.3
5,511,037	+				-0.3
5,511,038	-				-2.0
5,511,038	-				-3.2
5,511,038	-				-2.4
5,511,038	-				+1.0
5,511,038	-				-1.5
5,511,038	-				+0.7
5,511,038	-				-1.5
5,511,038	-				+0.0
5,511,038	-				-2.6
5,511,038	-				-2.3
5,511,038	-				+0.4
5,511,039	+				+0.5
5,511,040	-				+0.1
5,511,090	+				+0.2
5,511,090	+				+0.3
5,511,090	+				-1.6
5,511,090	+				-0.3
5,511,091	-				-0.3
5,511,091	-				+0.1
5,511,091	-				-0.9
5,511,091	-				+0.8
5,511,096	+		Pf6N2E2_4770	0.13	+0.4
5,511,187	+		Pf6N2E2_4770	0.70	+0.9
5,511,187	+		Pf6N2E2_4770	0.70	+1.1
5,511,188	-		Pf6N2E2_4770	0.70	+0.2
5,511,188	-		Pf6N2E2_4770	0.70	-0.4
5,511,188	-		Pf6N2E2_4770	0.70	-1.0
5,511,214	+		Pf6N2E2_4770	0.87	+1.6
5,511,214	+		Pf6N2E2_4770	0.87	-0.3
5,511,214	+		Pf6N2E2_4770	0.87	+0.9
5,511,214	+		Pf6N2E2_4770	0.87	+0.1
5,511,214	+		Pf6N2E2_4770	0.87	-0.1
5,511,214	+		Pf6N2E2_4770	0.87	+0.4
5,511,214	+		Pf6N2E2_4770	0.87	-0.1
5,511,214	+		Pf6N2E2_4770	0.87	+0.4
5,511,214	+		Pf6N2E2_4770	0.87	+1.4
5,511,215	-		Pf6N2E2_4770	0.87	+0.2
5,511,215	-		Pf6N2E2_4770	0.87	-0.5
5,511,215	-		Pf6N2E2_4770	0.87	-0.2
5,511,250	+				+0.9
5,511,250	+				+0.4
5,511,250	+				+0.4
5,511,251	-				+0.1
5,511,251	-				-3.3
5,511,365	+				+1.1
5,511,463	-				+0.4
5,511,463	-				-0.1
5,511,465	+				-0.0
5,511,465	+				+0.1
5,511,465	+				+0.7
5,511,465	+				-0.0
5,511,466	-				+0.7
5,511,466	-				-4.2
5,511,466	-				-1.3
5,511,466	-				+0.7
5,511,466	-				+0.2
5,511,497	+				+0.8
5,511,497	+				-0.1
5,511,497	+				+1.3
5,511,498	-				+0.3
5,511,498	-				-1.3
5,511,531	-				-0.2
5,511,661	-		Pf6N2E2_4771	0.16	-0.9
5,511,661	-		Pf6N2E2_4771	0.16	-0.7
5,511,717	+		Pf6N2E2_4771	0.19	-2.2
5,511,717	+		Pf6N2E2_4771	0.19	+0.2
5,511,718	-		Pf6N2E2_4771	0.19	-0.4
5,511,718	-		Pf6N2E2_4771	0.19	-1.7