Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4766

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
5,502,894	+				-0.7
5,502,904	+				+0.2
5,502,904	+				+0.4
5,502,904	+				+0.7
5,502,904	+				-1.8
5,502,905	-				+0.6
5,502,905	-				+0.9
5,502,905	-				-0.7
5,502,905	-				-0.0
5,502,905	-				-0.3
5,502,975	+		Pf6N2E2_4765	0.33	-0.1
5,502,976	-		Pf6N2E2_4765	0.33	+0.1
5,503,116	+		Pf6N2E2_4765	0.80	+0.2
5,503,116	+		Pf6N2E2_4765	0.80	-0.4
5,503,116	+		Pf6N2E2_4765	0.80	+0.7
5,503,117	-		Pf6N2E2_4765	0.81	-0.2
5,503,117	-		Pf6N2E2_4765	0.81	-0.6
5,503,117	-		Pf6N2E2_4765	0.81	+0.1
5,503,149	+				+1.4
5,503,150	-				-0.7
5,503,161	+				+0.8
5,503,161	+				-1.9
5,503,162	-				-1.3
5,503,236	+				-1.4
5,503,236	+				+1.7
5,503,237	-				+1.0
5,503,237	-				+0.1
5,503,237	-				+2.1
5,503,237	-				-0.4
5,503,237	-				-0.5
5,503,286	+				-0.5
5,503,286	+				-0.3
5,503,286	+				-0.4
5,503,368	+				+0.2
5,503,368	+				-3.3
5,503,368	+				+0.1
5,503,368	+				+1.2
5,503,369	-				-2.9
5,503,369	-				-3.1
5,503,394	+				-0.4
5,503,395	-				-2.6
5,503,427	+				+0.7
5,503,428	-				-2.5
5,503,428	-				-1.3
5,503,444	-				-1.0
5,503,449	+				-3.5
5,503,460	-				-3.4
5,503,460	-				-4.0
5,503,460	-				-4.4
5,503,460	-				-4.3
5,503,460	-				-2.5
5,503,460	-				-4.4
5,503,522	+				-3.3
5,503,523	-				-3.2
5,503,696	+		Pf6N2E2_4766	0.14	-4.5
5,503,696	+		Pf6N2E2_4766	0.14	-3.5
5,503,696	+		Pf6N2E2_4766	0.14	-2.8
5,503,696	+		Pf6N2E2_4766	0.14	-3.1
5,503,697	-		Pf6N2E2_4766	0.14	-4.3
5,503,697	-		Pf6N2E2_4766	0.14	-0.2
5,503,697	-		Pf6N2E2_4766	0.14	-4.3
5,503,697	-		Pf6N2E2_4766	0.14	-3.7
5,503,828	+		Pf6N2E2_4766	0.21	-2.0
5,503,829	-		Pf6N2E2_4766	0.21	-3.3
5,503,897	+		Pf6N2E2_4766	0.25	-3.5
5,503,897	+		Pf6N2E2_4766	0.25	-3.9
5,503,897	+		Pf6N2E2_4766	0.25	-4.3
5,503,897	+		Pf6N2E2_4766	0.25	-3.8
5,503,897	+		Pf6N2E2_4766	0.25	-2.3
5,504,014	+		Pf6N2E2_4766	0.31	-2.5
5,504,014	+		Pf6N2E2_4766	0.31	-3.3
5,504,014	+		Pf6N2E2_4766	0.31	-4.9
5,504,014	+		Pf6N2E2_4766	0.31	+1.4
5,504,014	+		Pf6N2E2_4766	0.31	-1.9
5,504,014	+		Pf6N2E2_4766	0.31	-3.1
5,504,014	+		Pf6N2E2_4766	0.31	-2.5
5,504,015	-		Pf6N2E2_4766	0.31	-3.0
5,504,015	-		Pf6N2E2_4766	0.31	-2.7
5,504,015	-		Pf6N2E2_4766	0.31	-2.6
5,504,015	-		Pf6N2E2_4766	0.31	-3.3
5,504,119	-		Pf6N2E2_4766	0.37	-3.7
5,504,398	+		Pf6N2E2_4766	0.52	-2.9
5,504,398	+		Pf6N2E2_4766	0.52	-3.0
5,504,399	-		Pf6N2E2_4766	0.53	-4.0
5,504,399	-		Pf6N2E2_4766	0.53	-0.7
5,504,399	-		Pf6N2E2_4766	0.53	-1.8
5,504,399	-		Pf6N2E2_4766	0.53	-4.5
5,504,542	+		Pf6N2E2_4766	0.60	+0.3
5,504,542	+		Pf6N2E2_4766	0.60	-3.3
5,504,542	+		Pf6N2E2_4766	0.60	-3.3
5,504,543	-		Pf6N2E2_4766	0.61	-4.4
5,504,543	-		Pf6N2E2_4766	0.61	-2.3
5,504,543	-		Pf6N2E2_4766	0.61	-2.4
5,504,543	-		Pf6N2E2_4766	0.61	-4.3
5,504,575	+		Pf6N2E2_4766	0.62	-2.0
5,504,575	+		Pf6N2E2_4766	0.62	-2.4
5,504,575	+		Pf6N2E2_4766	0.62	-1.8
5,504,575	+		Pf6N2E2_4766	0.62	-2.5
5,504,576	-		Pf6N2E2_4766	0.62	-3.8
5,504,576	-		Pf6N2E2_4766	0.62	-4.4
5,504,695	+		Pf6N2E2_4766	0.69	-3.8
5,504,695	+		Pf6N2E2_4766	0.69	-3.7
5,504,695	+		Pf6N2E2_4766	0.69	-1.4
5,504,695	+		Pf6N2E2_4766	0.69	-5.0
5,504,754	+		Pf6N2E2_4766	0.72	-2.1
5,504,754	+		Pf6N2E2_4766	0.72	-1.8
5,504,754	+		Pf6N2E2_4766	0.72	-2.9
5,504,754	+		Pf6N2E2_4766	0.72	-2.5
5,504,755	-		Pf6N2E2_4766	0.72	-4.3
5,504,767	+		Pf6N2E2_4766	0.73	-2.8
5,504,767	+		Pf6N2E2_4766	0.73	-4.7
5,504,767	+		Pf6N2E2_4766	0.73	-2.8
5,504,767	+		Pf6N2E2_4766	0.73	-2.9
5,504,767	+		Pf6N2E2_4766	0.73	-2.5
5,504,912	+		Pf6N2E2_4766	0.81	-4.1
5,504,912	+		Pf6N2E2_4766	0.81	-0.9
5,504,912	+		Pf6N2E2_4766	0.81	-3.4
5,505,016	+		Pf6N2E2_4766	0.87	-2.8
5,505,016	+		Pf6N2E2_4766	0.87	-3.1
5,505,025	+		Pf6N2E2_4766	0.87	-2.0
5,505,026	-		Pf6N2E2_4766	0.87	-3.8
5,505,034	+		Pf6N2E2_4766	0.88	-2.0
5,505,049	+		Pf6N2E2_4766	0.89	-2.8
5,505,049	+		Pf6N2E2_4766	0.89	-1.6
5,505,050	-		Pf6N2E2_4766	0.89	-3.0
5,505,118	+				-2.9
5,505,118	+				-3.6
5,505,118	+				-2.0
5,505,118	+				-3.2
5,505,118	+				-2.0
5,505,119	-				+1.3
5,505,119	-				-1.5
5,505,119	-				-2.6
5,505,119	-				-2.2
5,505,119	-				-2.8
5,505,119	-				-2.8
5,505,148	+				-3.4
5,505,148	+				-3.8
5,505,148	+				-2.8
5,505,148	+				-1.8
5,505,149	-				-1.3
5,505,149	-				-3.2
5,505,222	+				-2.9
5,505,223	-				-2.3
5,505,223	-				-3.7
5,505,251	-				-0.8
5,505,253	+				-0.1
5,505,253	+				-1.2
5,505,253	+				+0.4
5,505,254	-				+0.7
5,505,254	-				+0.9
5,505,254	-				-1.7
5,505,385	+				+1.1
5,505,385	+				-3.4
5,505,386	-				-0.3
5,505,386	-				-0.3
5,505,404	+				-1.3
5,505,405	-				-0.6
5,505,405	-				+0.6
5,505,405	-				+0.6
5,505,470	+				-4.0
5,505,470	+				+1.2
5,505,547	+				-1.0
5,505,547	+				+0.5
5,505,548	-				+1.1
5,505,548	-				+0.8
5,505,606	+				-1.0
5,505,606	+				-0.7
5,505,607	-				+0.7
5,505,607	-				-0.9
5,505,667	+		Pf6N2E2_4767	0.13	+0.2
5,505,667	+		Pf6N2E2_4767	0.13	-1.0
5,505,668	-		Pf6N2E2_4767	0.13	-0.5
5,505,684	+		Pf6N2E2_4767	0.14	-0.4
5,505,696	+		Pf6N2E2_4767	0.15	+1.1
5,505,736	-		Pf6N2E2_4767	0.18	+1.0
5,505,736	-		Pf6N2E2_4767	0.18	+0.2
5,505,736	-		Pf6N2E2_4767	0.18	-0.5
5,505,745	-		Pf6N2E2_4767	0.19	+0.2
5,505,960	+		Pf6N2E2_4767	0.35	-3.8
5,505,961	-		Pf6N2E2_4767	0.35	+0.3
5,506,045	-		Pf6N2E2_4767	0.41	-1.5
5,506,086	+		Pf6N2E2_4767	0.44	+0.1
5,506,087	-		Pf6N2E2_4767	0.44	+0.9
5,506,087	-		Pf6N2E2_4767	0.44	+0.2
5,506,087	-		Pf6N2E2_4767	0.44	-0.3
5,506,243	-		Pf6N2E2_4767	0.56	+0.3