Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3891

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
4,521,788	+				+1.9
4,521,827	+				+0.1
4,521,827	+				-0.7
4,521,828	-				-3.3
4,521,828	-				-0.1
4,521,833	+				+0.4
4,521,833	+				+0.3
4,521,833	+				+1.4
4,521,833	+				+0.4
4,521,834	-				-4.0
4,521,839	+				+0.6
4,521,839	+				+1.6
4,521,839	+				-0.7
4,521,840	-				-0.3
4,521,840	-				-1.1
4,521,840	-				-0.4
4,521,855	+				+0.1
4,521,855	+				+1.0
4,521,855	+				+0.8
4,521,855	+				+0.4
4,521,856	-				+0.1
4,521,925	+				-0.6
4,521,932	-				-0.6
4,522,000	+		Pf6N2E2_3890	0.17	-1.5
4,522,000	+		Pf6N2E2_3890	0.17	-0.9
4,522,000	+		Pf6N2E2_3890	0.17	-0.9
4,522,001	-		Pf6N2E2_3890	0.17	-1.7
4,522,001	-		Pf6N2E2_3890	0.17	-1.5
4,522,108	+		Pf6N2E2_3890	0.30	-2.8
4,522,108	+		Pf6N2E2_3890	0.30	+0.8
4,522,108	+		Pf6N2E2_3890	0.30	-0.7
4,522,108	+		Pf6N2E2_3890	0.30	-0.2
4,522,108	+		Pf6N2E2_3890	0.30	-0.5
4,522,108	+		Pf6N2E2_3890	0.30	-1.5
4,522,108	+		Pf6N2E2_3890	0.30	-0.3
4,522,108	+		Pf6N2E2_3890	0.30	+0.8
4,522,108	+		Pf6N2E2_3890	0.30	-1.1
4,522,108	+		Pf6N2E2_3890	0.30	-0.2
4,522,109	-		Pf6N2E2_3890	0.30	-0.1
4,522,109	-		Pf6N2E2_3890	0.30	+0.2
4,522,109	-		Pf6N2E2_3890	0.30	+1.0
4,522,109	-		Pf6N2E2_3890	0.30	-1.4
4,522,109	-		Pf6N2E2_3890	0.30	-1.3
4,522,109	-		Pf6N2E2_3890	0.30	-0.1
4,522,109	-		Pf6N2E2_3890	0.30	+0.7
4,522,109	-		Pf6N2E2_3890	0.30	+0.3
4,522,239	-		Pf6N2E2_3890	0.46	-3.4
4,522,667	-				-1.0
4,522,667	-				-0.4
4,522,667	-				-1.2
4,522,734	+				-0.9
4,522,735	-				-0.1
4,522,744	-				-0.0
4,522,744	-				-1.3
4,522,991	+		Pf6N2E2_3891	0.13	-0.9
4,522,991	+		Pf6N2E2_3891	0.13	-0.8
4,522,992	-		Pf6N2E2_3891	0.13	+0.4
4,523,023	-		Pf6N2E2_3891	0.14	-3.0
4,523,023	-		Pf6N2E2_3891	0.14	-0.8
4,523,034	+		Pf6N2E2_3891	0.15	-3.7
4,523,085	+		Pf6N2E2_3891	0.17	-0.1
4,523,170	-		Pf6N2E2_3891	0.20	-1.9
4,523,170	-		Pf6N2E2_3891	0.20	-0.9
4,523,170	-		Pf6N2E2_3891	0.20	-1.7
4,523,202	+		Pf6N2E2_3891	0.22	-2.3
4,523,203	-		Pf6N2E2_3891	0.22	-1.4
4,523,208	+		Pf6N2E2_3891	0.22	-1.9
4,523,208	+		Pf6N2E2_3891	0.22	-3.1
4,523,208	+		Pf6N2E2_3891	0.22	-0.5
4,523,208	+		Pf6N2E2_3891	0.22	-3.2
4,523,209	-		Pf6N2E2_3891	0.22	-2.0
4,523,209	-		Pf6N2E2_3891	0.22	-3.9
4,523,209	-		Pf6N2E2_3891	0.22	-1.0
4,523,209	-		Pf6N2E2_3891	0.22	-2.3
4,523,525	+		Pf6N2E2_3891	0.35	-0.6
4,523,526	-		Pf6N2E2_3891	0.36	+1.0
4,523,545	-		Pf6N2E2_3891	0.36	-0.3
4,523,694	+		Pf6N2E2_3891	0.43	-0.9
4,523,694	+		Pf6N2E2_3891	0.43	-4.8
4,523,784	+		Pf6N2E2_3891	0.46	-0.4
4,523,784	+		Pf6N2E2_3891	0.46	-1.4
4,523,784	+		Pf6N2E2_3891	0.46	-1.1
4,523,784	+		Pf6N2E2_3891	0.46	-2.7
4,523,784	+		Pf6N2E2_3891	0.46	+0.5
4,523,784	+		Pf6N2E2_3891	0.46	-0.5
4,523,785	-		Pf6N2E2_3891	0.47	+0.3
4,523,785	-		Pf6N2E2_3891	0.47	-1.9
4,523,785	-		Pf6N2E2_3891	0.47	-0.1
4,523,926	+		Pf6N2E2_3891	0.53	-2.1
4,524,450	+		Pf6N2E2_3891	0.75	-0.7
4,524,451	-		Pf6N2E2_3891	0.75	-0.7
4,524,484	+		Pf6N2E2_3891	0.76	-1.7
4,524,484	+		Pf6N2E2_3891	0.76	-0.5
4,524,534	+		Pf6N2E2_3891	0.78	-1.3
4,524,693	+		Pf6N2E2_3891	0.85	-2.2
4,524,693	+		Pf6N2E2_3891	0.85	-1.4
4,524,694	-		Pf6N2E2_3891	0.85	+0.8
4,524,694	-		Pf6N2E2_3891	0.85	-0.8
4,524,694	-		Pf6N2E2_3891	0.85	-0.3
4,524,694	-		Pf6N2E2_3891	0.85	-1.3
4,524,694	-		Pf6N2E2_3891	0.85	-3.3
4,524,694	-		Pf6N2E2_3891	0.85	-1.1
4,524,694	-		Pf6N2E2_3891	0.85	-0.1
4,524,694	-		Pf6N2E2_3891	0.85	+0.2
4,524,708	+		Pf6N2E2_3891	0.86	-0.5
4,524,708	+		Pf6N2E2_3891	0.86	-1.8
4,524,708	+		Pf6N2E2_3891	0.86	+0.2
4,524,708	+		Pf6N2E2_3891	0.86	-1.0
4,524,708	+		Pf6N2E2_3891	0.86	+0.6
4,524,709	-		Pf6N2E2_3891	0.86	-1.0
4,524,709	-		Pf6N2E2_3891	0.86	-1.4
4,524,906	+				-1.1
4,524,906	+				-1.0
4,524,906	+				-4.1
4,524,906	+				-1.1
4,524,907	-				+0.3
4,524,907	-				-0.5
4,524,907	-				-0.1
4,525,046	+				-0.3
4,525,046	+				-2.7
4,525,046	+				+1.4
4,525,046	+				+0.2
4,525,046	+				+0.1
4,525,046	+				-0.4
4,525,046	+				-0.4
4,525,047	-				-1.1
4,525,047	-				+1.2
4,525,133	+				+0.6
4,525,133	+				-0.4
4,525,134	-				+0.3
4,525,134	-				+1.0
4,525,190	-				+0.9
4,525,279	+				-0.1
4,525,284	+				+0.0
4,525,285	-				-2.4
4,525,403	+		Pf6N2E2_3892	0.14	+1.6
4,525,491	-		Pf6N2E2_3892	0.32	+0.9
4,525,680	+		Pf6N2E2_3892	0.71	+0.7
4,525,680	+		Pf6N2E2_3892	0.71	-0.4
4,525,680	+		Pf6N2E2_3892	0.71	+0.2
4,525,680	+		Pf6N2E2_3892	0.71	+0.5
4,525,680	+		Pf6N2E2_3892	0.71	-1.1
4,525,680	+		Pf6N2E2_3892	0.71	-1.6
4,525,680	+		Pf6N2E2_3892	0.71	+0.8
4,525,680	+		Pf6N2E2_3892	0.71	+0.0
4,525,680	+		Pf6N2E2_3892	0.71	+1.4
4,525,680	+		Pf6N2E2_3892	0.71	+0.3
4,525,680	+		Pf6N2E2_3892	0.71	+0.0
4,525,680	+		Pf6N2E2_3892	0.71	+0.7
4,525,680	+		Pf6N2E2_3892	0.71	+0.7
4,525,680	+		Pf6N2E2_3892	0.71	-0.3
4,525,680	+		Pf6N2E2_3892	0.71	+0.8
4,525,680	+		Pf6N2E2_3892	0.71	-0.1
4,525,680	+		Pf6N2E2_3892	0.71	+1.2
4,525,680	+		Pf6N2E2_3892	0.71	+0.6
4,525,681	-		Pf6N2E2_3892	0.71	+0.6
4,525,681	-		Pf6N2E2_3892	0.71	-1.2
4,525,681	-		Pf6N2E2_3892	0.71	+0.1
4,525,681	-		Pf6N2E2_3892	0.71	+0.7
4,525,681	-		Pf6N2E2_3892	0.71	-2.6
4,525,681	-		Pf6N2E2_3892	0.71	+0.2
4,525,681	-		Pf6N2E2_3892	0.71	+0.9
4,525,681	-		Pf6N2E2_3892	0.71	+0.4
4,525,681	-		Pf6N2E2_3892	0.71	-0.7
4,525,681	-		Pf6N2E2_3892	0.71	+1.0
4,525,713	+		Pf6N2E2_3892	0.78	-0.1
4,525,714	-		Pf6N2E2_3892	0.78	+0.2
4,525,714	-		Pf6N2E2_3892	0.78	-0.1
4,525,740	+		Pf6N2E2_3892	0.84	-0.3
4,525,743	+		Pf6N2E2_3892	0.84	-1.5
4,525,743	+		Pf6N2E2_3892	0.84	+1.2
4,525,744	-		Pf6N2E2_3892	0.85	+1.0
4,525,803	+				-1.8
4,525,803	+				+0.5
4,525,807	-				+0.3
4,525,829	+				+0.5
4,525,926	+				+0.4
4,525,927	-				-2.5
4,525,974	+		Pf6N2E2_3893	0.19	-2.7
4,525,974	+		Pf6N2E2_3893	0.19	-0.7
4,525,975	-		Pf6N2E2_3893	0.19	+0.6
4,525,975	-		Pf6N2E2_3893	0.19	-0.1
4,525,975	-		Pf6N2E2_3893	0.19	+0.5
4,525,975	-		Pf6N2E2_3893	0.19	-1.1
4,526,039	-		Pf6N2E2_3893	0.34	-1.4