Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3388

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
3,919,803	+		Pf6N2E2_3387	0.60	-0.3
3,919,803	+		Pf6N2E2_3387	0.60	-1.4
3,919,896	+		Pf6N2E2_3387	0.68	-0.6
3,919,897	-		Pf6N2E2_3387	0.68	+0.4
3,919,954	+		Pf6N2E2_3387	0.72	+0.6
3,919,954	+		Pf6N2E2_3387	0.72	+1.0
3,919,954	+		Pf6N2E2_3387	0.72	+0.0
3,919,954	+		Pf6N2E2_3387	0.72	+0.2
3,919,954	+		Pf6N2E2_3387	0.72	+1.2
3,919,955	-		Pf6N2E2_3387	0.72	-1.3
3,919,955	-		Pf6N2E2_3387	0.72	-1.0
3,919,955	-		Pf6N2E2_3387	0.72	-2.3
3,919,971	+		Pf6N2E2_3387	0.74	-0.1
3,919,971	+		Pf6N2E2_3387	0.74	-1.3
3,919,971	+		Pf6N2E2_3387	0.74	-0.0
3,919,996	-		Pf6N2E2_3387	0.76	-0.4
3,920,045	+		Pf6N2E2_3387	0.80	+0.5
3,920,045	+		Pf6N2E2_3387	0.80	-1.3
3,920,046	-		Pf6N2E2_3387	0.80	+0.5
3,920,046	-		Pf6N2E2_3387	0.80	-0.8
3,920,046	-		Pf6N2E2_3387	0.80	+0.2
3,920,046	-		Pf6N2E2_3387	0.80	+1.0
3,920,161	+		Pf6N2E2_3387	0.89	-0.3
3,920,162	-		Pf6N2E2_3387	0.89	-0.5
3,920,176	+				-0.6
3,920,176	+				+0.0
3,920,177	-				+0.9
3,920,177	-				+0.3
3,920,177	-				+0.7
3,920,177	-				+1.8
3,920,177	-				-0.4
3,920,220	+				+0.5
3,920,220	+				+0.5
3,920,374	-				+1.1
3,920,384	+				-0.3
3,920,416	+				-0.5
3,920,417	-				+0.9
3,920,457	+				+0.0
3,920,466	+				-0.3
3,920,516	+				-2.2
3,920,523	+				+0.4
3,920,523	+				-0.6
3,920,523	+				-1.6
3,920,523	+				-2.7
3,920,524	-				+0.1
3,920,524	-				-0.7
3,920,524	-				+0.0
3,920,526	+				+0.6
3,920,526	+				+0.7
3,920,526	+				-0.4
3,920,526	+				-1.2
3,920,526	+				+0.7
3,920,526	+				+0.0
3,920,527	-				+0.6
3,920,527	-				+0.3
3,920,527	-				-0.1
3,920,527	-				+1.5
3,920,527	-				+0.2
3,920,527	-				+2.2
3,920,527	-				+0.1
3,920,529	+				+0.9
3,920,529	+				+0.5
3,920,529	+				-0.8
3,920,529	+				+0.2
3,920,530	-				-0.4
3,920,536	+				+0.5
3,920,536	+				+2.2
3,920,537	-				-0.0
3,920,537	-				+0.4
3,920,559	+				+1.6
3,920,560	-				-0.4
3,920,560	-				+0.4
3,920,560	-				-0.4
3,920,659	+				+1.3
3,920,660	-				-0.3
3,920,660	-				-1.3
3,920,753	+				-2.9
3,920,753	+				+1.0
3,920,753	+				+0.5
3,920,754	-				+0.3
3,920,754	-				-0.2
3,920,778	+				+1.6
3,920,778	+				-0.0
3,920,779	-				-0.9
3,920,779	-				+0.2
3,920,889	-		Pf6N2E2_3388	0.16	-0.0
3,920,903	+		Pf6N2E2_3388	0.17	+1.7
3,920,903	+		Pf6N2E2_3388	0.17	-2.2
3,920,904	-		Pf6N2E2_3388	0.17	+0.9
3,920,904	-		Pf6N2E2_3388	0.17	-0.1
3,920,980	+		Pf6N2E2_3388	0.25	+0.0
3,920,980	+		Pf6N2E2_3388	0.25	+0.7
3,920,981	-		Pf6N2E2_3388	0.25	-0.8
3,920,993	+		Pf6N2E2_3388	0.26	+0.2
3,920,994	-		Pf6N2E2_3388	0.26	+1.3
3,921,084	+		Pf6N2E2_3388	0.35	+0.4
3,921,084	+		Pf6N2E2_3388	0.35	+0.2
3,921,383	+		Pf6N2E2_3388	0.66	+1.0
3,921,383	+		Pf6N2E2_3388	0.66	+0.7
3,921,383	+		Pf6N2E2_3388	0.66	+1.5
3,921,383	+		Pf6N2E2_3388	0.66	+0.9
3,921,384	-		Pf6N2E2_3388	0.66	+1.6
3,921,484	-		Pf6N2E2_3388	0.76	+0.5
3,921,494	+		Pf6N2E2_3388	0.77	+0.2
3,921,494	+		Pf6N2E2_3388	0.77	+0.4
3,921,656	+				-0.2
3,921,656	+				+0.7
3,921,657	-				+0.7
3,921,657	-				+1.0
3,921,657	-				+0.2
3,921,657	-				+0.4
3,921,685	-				+0.7
3,921,736	+				+0.3
3,921,736	+				+0.2
3,921,736	+				+0.3
3,921,736	+				+1.8
3,921,736	+				+0.6
3,921,737	-				-0.3
3,921,740	+				-1.1
3,921,740	+				-2.0
3,921,740	+				-0.5
3,921,740	+				+0.4
3,921,740	+				+0.5
3,921,740	+				-0.3
3,921,741	-				-1.2
3,921,741	-				-1.3
3,921,741	-				+0.6
3,921,741	-				+1.3
3,921,741	-				-0.4
3,921,741	-				-0.3
3,921,741	-				+1.0
3,921,741	-				+0.4
3,921,773	+				-0.7
3,921,773	+				-0.6
3,921,773	+				-0.9
3,921,774	-				-2.1
3,921,774	-				+0.0
3,921,774	-				-1.1
3,921,774	-				-0.6
3,921,832	-				-0.4
3,921,832	-				+0.7
3,921,887	-				-0.3
3,921,892	+				+0.2
3,921,892	+				-0.7
3,921,892	+				-1.4
3,921,892	+				-0.7
3,921,892	+				+0.2
3,921,893	-				-3.1
3,921,974	-				-0.0
3,922,024	+				+0.6
3,922,024	+				-1.3
3,922,024	+				+1.3
3,922,024	+				-2.1
3,922,024	+				+0.5
3,922,025	-				-1.5
3,922,028	+				-0.8
3,922,028	+				-1.0
3,922,140	-				+0.5
3,922,140	-				-1.3
3,922,140	-				-1.8
3,922,178	+		Pf6N2E2_3389	0.10	+0.4
3,922,288	+		Pf6N2E2_3389	0.19	-0.6
3,922,288	+		Pf6N2E2_3389	0.19	+0.4
3,922,289	-		Pf6N2E2_3389	0.19	+1.2
3,922,289	-		Pf6N2E2_3389	0.19	-0.8
3,922,289	-		Pf6N2E2_3389	0.19	+1.1
3,922,289	-		Pf6N2E2_3389	0.19	+0.9
3,922,289	-		Pf6N2E2_3389	0.19	+0.4
3,922,289	-		Pf6N2E2_3389	0.19	+0.3
3,922,320	-		Pf6N2E2_3389	0.21	+1.2
3,922,333	-		Pf6N2E2_3389	0.22	+0.5
3,922,350	+		Pf6N2E2_3389	0.23	+1.9
3,922,414	-		Pf6N2E2_3389	0.28	+0.2
3,922,454	+		Pf6N2E2_3389	0.31	-0.8
3,922,464	+		Pf6N2E2_3389	0.32	+1.3
3,922,464	+		Pf6N2E2_3389	0.32	-0.1
3,922,464	+		Pf6N2E2_3389	0.32	+0.0
3,922,464	+		Pf6N2E2_3389	0.32	+0.1
3,922,464	+		Pf6N2E2_3389	0.32	+0.2
3,922,464	+		Pf6N2E2_3389	0.32	+1.0
3,922,464	+		Pf6N2E2_3389	0.32	+1.8
3,922,464	+		Pf6N2E2_3389	0.32	+0.0
3,922,465	-		Pf6N2E2_3389	0.32	+1.6
3,922,465	-		Pf6N2E2_3389	0.32	-0.1
3,922,465	-		Pf6N2E2_3389	0.32	+0.4
3,922,465	-		Pf6N2E2_3389	0.32	+2.8
3,922,465	-		Pf6N2E2_3389	0.32	+0.1
3,922,465	-		Pf6N2E2_3389	0.32	-0.0
3,922,465	-		Pf6N2E2_3389	0.32	+0.7
3,922,465	-		Pf6N2E2_3389	0.32	+0.4
3,922,465	-		Pf6N2E2_3389	0.32	-0.2
3,922,465	-		Pf6N2E2_3389	0.32	-0.7
3,922,465	-		Pf6N2E2_3389	0.32	+1.7
3,922,465	-		Pf6N2E2_3389	0.32	+0.8
3,922,503	-		Pf6N2E2_3389	0.35	-2.6
3,922,512	+		Pf6N2E2_3389	0.35	+0.8
3,922,512	+		Pf6N2E2_3389	0.35	-0.2
3,922,513	-		Pf6N2E2_3389	0.35	-0.5
3,922,513	-		Pf6N2E2_3389	0.35	+0.0
3,922,621	+		Pf6N2E2_3389	0.43	-1.1
3,922,622	-		Pf6N2E2_3389	0.44	+1.7
3,922,622	-		Pf6N2E2_3389	0.44	-2.2
3,922,707	+		Pf6N2E2_3389	0.50	+0.0
3,922,707	+		Pf6N2E2_3389	0.50	-0.7