Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25415

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
6,170,717	-				-1.2
6,170,726	-				+0.8
6,170,726	-				+0.1
6,170,726	-				+0.4
6,170,728	+				+0.0
6,170,770	+				-0.3
6,170,805	+		CA265_RS25410	0.15	+0.1
6,170,831	-		CA265_RS25410	0.20	-0.1
6,170,950	+		CA265_RS25410	0.44	-0.7
6,170,950	+		CA265_RS25410	0.44	-0.2
6,170,959	+		CA265_RS25410	0.45	+0.3
6,170,959	+		CA265_RS25410	0.45	+0.9
6,170,960	-		CA265_RS25410	0.46	+0.6
6,170,963	-		CA265_RS25410	0.46	-0.1
6,170,963	-		CA265_RS25410	0.46	-1.6
6,171,004	-		CA265_RS25410	0.54	+0.4
6,171,004	-		CA265_RS25410	0.54	-0.9
6,171,013	+		CA265_RS25410	0.56	+0.1
6,171,092	+		CA265_RS25410	0.72	+0.1
6,171,093	-		CA265_RS25410	0.72	+0.8
6,171,095	-		CA265_RS25410	0.72	-0.1
6,171,095	-		CA265_RS25410	0.72	-0.2
6,171,103	+		CA265_RS25410	0.74	+1.1
6,171,280	+				-1.7
6,171,317	+				-1.3
6,171,317	+				-1.8
6,171,492	+		CA265_RS25415	0.23	-2.6
6,171,493	-		CA265_RS25415	0.23	+0.0
6,171,501	+		CA265_RS25415	0.23	-1.0
6,171,519	+		CA265_RS25415	0.25	-1.5
6,171,617	+		CA265_RS25415	0.33	-0.9
6,171,680	+		CA265_RS25415	0.38	-1.1
6,171,681	-		CA265_RS25415	0.38	-1.8
6,171,744	-		CA265_RS25415	0.43	-1.1
6,171,757	-		CA265_RS25415	0.44	-0.1
6,171,776	+		CA265_RS25415	0.46	-1.0
6,171,864	-		CA265_RS25415	0.53	-0.6
6,171,939	-		CA265_RS25415	0.59	-2.4
6,171,959	-		CA265_RS25415	0.61	-3.4
6,172,043	-		CA265_RS25415	0.67	-1.0
6,172,060	+		CA265_RS25415	0.69	-1.3
6,172,060	+		CA265_RS25415	0.69	-2.3
6,172,092	-		CA265_RS25415	0.71	-1.2
6,172,092	-		CA265_RS25415	0.71	-2.8
6,172,092	-		CA265_RS25415	0.71	-1.7
6,172,100	+		CA265_RS25415	0.72	+0.1
6,172,294	-		CA265_RS25415	0.88	-1.6
6,172,336	+				-0.8
6,172,336	+				+0.5
6,172,337	-				-2.0
6,172,337	-				-2.4
6,172,340	+				-1.8
6,172,383	+				-1.3
6,172,452	-				+0.1
6,172,601	+				-0.2