Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22315

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
5,478,982	-		CA265_RS22305	0.59	-0.0
5,479,124	+				-0.0
5,479,125	-				-0.7
5,479,125	-				-0.4
5,479,125	-				-0.4
5,479,128	+				-0.3
5,479,128	+				-0.1
5,479,130	+				-0.4
5,479,143	-				-0.1
5,479,232	+				+0.3
5,479,268	+				+0.2
5,479,272	+				+0.2
5,479,274	+				-1.0
5,479,449	+		CA265_RS22310	0.38	+0.2
5,479,449	+		CA265_RS22310	0.38	+0.0
5,479,450	-		CA265_RS22310	0.38	+1.1
5,479,450	-		CA265_RS22310	0.38	-0.5
5,479,450	-		CA265_RS22310	0.38	+0.1
5,479,575	+				+1.0
5,479,592	+		CA265_RS22310	0.65	-0.7
5,479,593	-		CA265_RS22310	0.65	+0.1
5,479,611	+				+1.0
5,479,689	-		CA265_RS22310	0.83	+0.3
5,479,689	-		CA265_RS22310	0.83	-0.6
5,479,708	+		CA265_RS22310	0.87	-0.8
5,479,710	+		CA265_RS22310	0.87	+0.7
5,479,711	-		CA265_RS22310	0.88	+0.6
5,479,774	+				-1.3
5,479,779	+				-0.6
5,479,783	+				-1.6
5,479,803	+				+0.0
5,479,803	+				+0.4
5,479,979	+				-0.5
5,480,040	-		CA265_RS22315	0.13	-1.0
5,480,072	+		CA265_RS22315	0.19	-0.8
5,480,075	+		CA265_RS22315	0.20	-1.2
5,480,080	-		CA265_RS22315	0.21	+0.4
5,480,161	-		CA265_RS22315	0.36	-0.6
5,480,161	-		CA265_RS22315	0.36	-0.4
5,480,215	+		CA265_RS22315	0.46	-1.3
5,480,241	-		CA265_RS22315	0.51	+0.1
5,480,253	+		CA265_RS22315	0.53	+0.5
5,480,331	+		CA265_RS22315	0.68	-0.9
5,480,345	-		CA265_RS22315	0.70	-0.6
5,480,402	+		CA265_RS22315	0.81	-0.6
5,480,438	-		CA265_RS22315	0.88	-0.0
5,480,457	+				-0.6
5,480,458	-				-0.3
5,480,588	-				-0.8
5,480,660	-				-0.2
5,480,660	-				-0.5
5,480,708	+				+0.3
5,480,709	-				+0.6
5,480,893	+		CA265_RS22320	0.40	+0.3
5,480,894	-		CA265_RS22320	0.41	+0.2
5,480,899	+		CA265_RS22320	0.43	-2.3
5,480,899	+		CA265_RS22320	0.43	-0.5
5,480,900	-		CA265_RS22320	0.43	-0.2
5,481,029	-				-0.4
5,481,165	+				+0.1
5,481,165	+				+0.8
5,481,219	-		CA265_RS22325	0.12	-0.8
5,481,223	+		CA265_RS22325	0.12	-0.3
5,481,231	-		CA265_RS22325	0.13	+0.1
5,481,233	+		CA265_RS22325	0.13	+0.2
5,481,234	-		CA265_RS22325	0.13	-0.6
5,481,235	+		CA265_RS22325	0.14	+0.2
5,481,235	+		CA265_RS22325	0.14	-0.3
5,481,281	+		CA265_RS22325	0.17	-1.1
5,481,307	+		CA265_RS22325	0.20	-0.2
5,481,329	+		CA265_RS22325	0.22	+0.9
5,481,329	+		CA265_RS22325	0.22	-0.2
5,481,330	-		CA265_RS22325	0.22	+0.4