Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS22080

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
5,425,764	+				+0.0
5,425,785	-				+0.5
5,425,785	-				+0.1
5,425,805	-				+0.2
5,425,891	+				-0.4
5,425,892	-				+1.1
5,425,997	+				+0.0
5,425,998	-				+0.5
5,426,012	+				+0.3
5,426,026	+				+0.5
5,426,032	-				+0.0
5,426,079	+				-0.2
5,426,080	-				+0.7
5,426,108	+				-1.0
5,426,126	-				+0.6
5,426,126	-				+0.1
5,426,126	-				+0.3
5,426,128	-				-1.2
5,426,162	+				-0.5
5,426,193	-				-0.3
5,426,193	-				-0.1
5,426,268	+		CA265_RS22075	0.20	+0.8
5,426,280	+		CA265_RS22075	0.23	-0.3
5,426,281	-		CA265_RS22075	0.24	-0.4
5,426,325	+		CA265_RS22075	0.34	+0.2
5,426,326	-		CA265_RS22075	0.34	-0.6
5,426,326	-		CA265_RS22075	0.34	+0.3
5,426,326	-		CA265_RS22075	0.34	-0.0
5,426,326	-		CA265_RS22075	0.34	-0.5
5,426,327	+		CA265_RS22075	0.35	-0.9
5,426,416	-		CA265_RS22075	0.56	+0.1
5,426,424	+		CA265_RS22075	0.58	-1.0
5,426,460	+		CA265_RS22075	0.66	-0.7
5,426,460	+		CA265_RS22075	0.66	-0.0
5,426,461	-		CA265_RS22075	0.66	+0.8
5,426,540	+				+2.0
5,426,608	+				+1.2
5,426,672	+				-0.5
5,426,672	+				-0.8
5,426,677	-				+1.9
5,426,749	-				+2.0
5,426,751	+				+0.1
5,426,751	+				-0.8
5,426,762	-				+0.0
5,426,818	+		CA265_RS22080	0.21	+0.1
5,426,854	-		CA265_RS22080	0.30	-1.1
5,426,896	-		CA265_RS22080	0.40	-1.7
5,426,955	+		CA265_RS22080	0.54	-0.9
5,427,042	+		CA265_RS22080	0.75	-0.2
5,427,150	+				-1.2
5,427,258	+				-0.9
5,427,383	+				-0.7
5,427,395	-				+0.0
5,427,422	-				+0.0
5,427,464	+				+1.0
5,427,486	-				-0.1
5,427,486	-				+0.0
5,427,644	+		CA265_RS22085	0.17	+0.8
5,427,644	+		CA265_RS22085	0.17	+0.5
5,427,645	-		CA265_RS22085	0.17	+0.4
5,427,678	+		CA265_RS22085	0.19	-0.2
5,427,679	-		CA265_RS22085	0.19	-0.7
5,427,679	-		CA265_RS22085	0.19	-0.3
5,427,721	+		CA265_RS22085	0.22	+0.3
5,427,831	-		CA265_RS22085	0.29	+0.6
5,427,831	-		CA265_RS22085	0.29	+0.2
5,427,834	-		CA265_RS22085	0.30	+0.8
5,427,834	-		CA265_RS22085	0.30	+0.6
5,427,834	-		CA265_RS22085	0.30	-0.2
5,427,874	-		CA265_RS22085	0.32	+0.9
5,427,884	-		CA265_RS22085	0.33	-0.4
5,427,884	-				+2.0
5,427,903	-		CA265_RS22085	0.34	-0.1
5,427,962	+		CA265_RS22085	0.38	+0.1
5,427,963	-		CA265_RS22085	0.38	+0.3
5,427,982	+		CA265_RS22085	0.39	+1.2
5,428,038	+		CA265_RS22085	0.43	-0.0
5,428,110	+		CA265_RS22085	0.48	-0.9
5,428,110	+		CA265_RS22085	0.48	-0.5
5,428,120	-		CA265_RS22085	0.48	-0.6
5,428,121	+		CA265_RS22085	0.48	-0.2