Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21185

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
5,215,038	-		CA265_RS21180	0.73	+1.1
5,215,174	-		CA265_RS21180	0.87	-1.8
5,215,349	-				+0.8
5,215,369	-				-0.5
5,215,752	+				-1.6
5,215,940	-		CA265_RS21185	0.12	-1.0
5,216,047	-		CA265_RS21185	0.18	+0.1
5,216,190	+		CA265_RS21185	0.27	+1.5
5,216,191	-		CA265_RS21185	0.27	+0.1
5,216,273	-		CA265_RS21185	0.33	-0.9
5,216,282	+		CA265_RS21185	0.33	-1.2
5,216,292	-		CA265_RS21185	0.34	-1.0
5,216,376	-		CA265_RS21185	0.39	-0.2
5,216,489	+		CA265_RS21185	0.46	-0.9
5,216,553	+		CA265_RS21185	0.50	-1.1
5,216,588	+		CA265_RS21185	0.52	-0.6
5,216,599	+				+1.1
5,216,687	-		CA265_RS21185	0.59	-0.7
5,216,730	+		CA265_RS21185	0.61	+0.5
5,216,731	-		CA265_RS21185	0.61	-0.9
5,216,733	-		CA265_RS21185	0.61	-0.5
5,216,775	-		CA265_RS21185	0.64	-0.0
5,217,048	+		CA265_RS21185	0.81	-1.2
5,217,055	-		CA265_RS21185	0.82	-0.6
5,217,061	+		CA265_RS21185	0.82	-1.6
5,217,062	-		CA265_RS21185	0.82	-1.0
5,217,096	-		CA265_RS21185	0.84	+0.8
5,217,099	+		CA265_RS21185	0.85	-0.7
5,217,109	-		CA265_RS21185	0.85	-0.5
5,217,291	-				-2.3
5,217,347	-				+0.1
5,217,378	+				+0.8
5,217,383	-				-0.0
5,217,397	-				+0.3
5,217,437	+				-0.4
5,217,454	+				-1.6
5,217,474	+				-0.7
5,217,500	+		CA265_RS21190	0.11	-2.0
5,217,533	-		CA265_RS21190	0.17	+0.8
5,217,533	-		CA265_RS21190	0.17	-0.5
5,217,587	-				+0.1
5,217,596	+		CA265_RS21190	0.30	+1.2
5,217,662	+		CA265_RS21190	0.42	-0.4
5,217,662	+		CA265_RS21190	0.42	-0.9
5,217,662	+		CA265_RS21190	0.42	-1.0
5,217,695	+		CA265_RS21190	0.49	-1.1
5,217,703	+		CA265_RS21190	0.50	+1.2
5,217,703	+		CA265_RS21190	0.50	-0.9
5,217,707	-		CA265_RS21190	0.51	-0.9
5,217,715	-		CA265_RS21190	0.53	+0.1
5,217,717	-		CA265_RS21190	0.53	+0.9
5,217,783	+		CA265_RS21190	0.66	+1.1
5,217,788	+		CA265_RS21190	0.67	-2.0
5,217,789	-		CA265_RS21190	0.67	-0.4
5,217,841	-		CA265_RS21190	0.77	-1.0
5,217,844	+		CA265_RS21190	0.78	-0.5
5,217,845	-		CA265_RS21190	0.78	+1.1
5,217,901	+		CA265_RS21190	0.89	+0.3
5,217,924	+				+0.4
5,217,933	+				+1.3
5,217,933	+				-0.3
5,217,955	-				-0.2
5,218,008	+				+0.6
5,218,008	+				-0.5
5,218,121	-				-0.6
5,218,165	+				+0.5
5,218,194	+				-0.5
5,218,210	+				+0.7
5,218,221	+		CA265_RS21195	0.10	-1.1
5,218,223	+		CA265_RS21195	0.10	-0.3
5,218,224	-		CA265_RS21195	0.10	-1.2