Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20890

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
5,149,994	-				+0.7
5,150,016	+		CA265_RS20880	0.10	-0.8
5,150,016	+		CA265_RS20880	0.10	+0.0
5,150,041	-		CA265_RS20880	0.14	+0.2
5,150,041	-		CA265_RS20880	0.14	-0.7
5,150,046	+		CA265_RS20880	0.15	+0.3
5,150,069	+		CA265_RS20880	0.19	+0.9
5,150,076	-		CA265_RS20880	0.20	+0.3
5,150,111	-		CA265_RS20880	0.25	+0.7
5,150,170	-		CA265_RS20880	0.34	+0.3
5,150,377	+		CA265_RS20880	0.67	+0.2
5,150,389	-		CA265_RS20880	0.69	+1.0
5,150,453	+		CA265_RS20880	0.79	-1.2
5,150,461	-		CA265_RS20880	0.80	-0.1
5,150,579	+				-2.1
5,150,580	-				-1.6
5,150,605	-				+0.0
5,150,607	+				-0.7
5,150,625	-				-0.5
5,150,866	-				+0.1
5,150,891	-				-0.9
5,150,893	-				+0.1
5,151,315	+		CA265_RS20890	0.37	-2.0
5,151,590	+		CA265_RS20890	0.62	-0.5
5,151,772	+		CA265_RS20890	0.79	-0.2
5,151,790	+		CA265_RS20890	0.81	+0.1
5,152,000	-				-1.8
5,152,002	+				+1.2
5,152,045	+				+0.3
5,152,046	-				-1.5
5,152,088	+				+0.6
5,152,110	-				+1.5
5,152,198	+				-0.1
5,152,216	+				-1.6
5,152,232	+				-0.2
5,152,281	-				+0.6
5,152,361	+		CA265_RS20895	0.11	-1.2
5,152,362	-		CA265_RS20895	0.11	+2.1
5,152,389	-		CA265_RS20895	0.12	-0.4
5,152,401	-		CA265_RS20895	0.13	-0.0
5,152,429	+		CA265_RS20895	0.14	-0.5
5,152,495	+		CA265_RS20895	0.17	-0.3
5,152,496	-		CA265_RS20895	0.17	-0.2
5,152,556	+		CA265_RS20895	0.20	-1.3
5,152,592	-		CA265_RS20895	0.21	+1.8
5,152,637	+		CA265_RS20895	0.24	-0.4
5,152,679	+		CA265_RS20895	0.26	-0.7
5,152,680	-		CA265_RS20895	0.26	-0.9
5,152,783	-		CA265_RS20895	0.30	+1.1
5,152,786	+		CA265_RS20895	0.30	-0.0
5,152,807	+		CA265_RS20895	0.31	-0.4
5,152,889	+		CA265_RS20895	0.35	+1.6
5,152,936	-		CA265_RS20895	0.37	-0.9