Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20525

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
5,080,348	-				-0.5
5,080,356	+				+0.3
5,080,356	+				-0.1
5,080,356	+				+0.9
5,080,357	-				+0.5
5,080,376	+				+0.5
5,080,377	-				-0.7
5,080,377	-				+0.8
5,080,382	-				-1.2
5,080,387	-				-0.7
5,080,395	+				-1.3
5,080,395	+				-0.3
5,080,472	-				-0.7
5,080,475	-				-0.5
5,080,483	-				-0.7
5,080,528	+				+0.8
5,080,528	+				+0.6
5,080,705	+		CA265_RS20520	0.27	-0.5
5,080,706	-		CA265_RS20520	0.27	-0.5
5,080,706	-		CA265_RS20520	0.27	+0.0
5,080,706	-		CA265_RS20520	0.27	+0.1
5,080,706	-		CA265_RS20520	0.27	-0.2
5,080,715	-		CA265_RS20520	0.28	+1.4
5,080,786	+		CA265_RS20520	0.37	-0.1
5,080,826	-		CA265_RS20520	0.42	-0.5
5,080,827	+		CA265_RS20520	0.42	-0.1
5,080,828	-		CA265_RS20520	0.42	-0.1
5,080,828	-		CA265_RS20520	0.42	-0.7
5,080,829	+		CA265_RS20520	0.42	+0.3
5,080,829	+		CA265_RS20520	0.42	-1.1
5,080,849	-		CA265_RS20520	0.45	-0.1
5,080,925	-		CA265_RS20520	0.54	-0.4
5,081,023	+		CA265_RS20520	0.66	+1.4
5,081,159	-		CA265_RS20520	0.82	+0.3
5,081,163	-		CA265_RS20520	0.83	-1.2
5,081,185	-		CA265_RS20520	0.86	+0.8
5,081,197	+		CA265_RS20520	0.87	-1.7
5,081,197	+		CA265_RS20520	0.87	-2.2
5,081,252	-				+0.8
5,081,252	-				-0.4
5,081,260	+				-1.0
5,081,292	+				-0.2
5,081,292	+				+0.6
5,081,292	+				-0.0
5,081,292	+				+0.2
5,081,295	+				-0.0
5,081,302	+				+2.1
5,081,303	-				-0.1
5,081,521	+		CA265_RS20525	0.86	+1.1
5,081,521	+		CA265_RS20525	0.86	-1.1
5,081,522	-		CA265_RS20525	0.86	+0.9
5,081,566	+				+0.4
5,081,744	+		CA265_RS20530	0.81	-0.3
5,081,770	+				-0.6
5,081,770	+				+0.9
5,081,800	+				+0.1
5,081,814	+				-0.1
5,081,858	+				+0.2
5,081,864	+				-1.1
5,081,891	+				-0.4
5,081,891	+				+0.7
5,081,893	+				-0.4
5,081,894	-				-0.5
5,081,902	+				-1.2
5,081,902	+				-0.6
5,081,902	+				+1.0
5,081,903	-				+0.4
5,081,903	-				-0.2
5,081,907	+				-0.9
5,081,915	+				-1.0
5,081,966	-				-0.8
5,081,966	-				-0.4
5,082,031	-				-0.6
5,082,111	-		CA265_RS20535	0.26	-0.3
5,082,212	+		CA265_RS20535	0.50	-1.6
5,082,213	-		CA265_RS20535	0.50	-0.8
5,082,313	+		CA265_RS20535	0.73	-0.2
5,082,314	-		CA265_RS20535	0.73	-0.8
5,082,314	-		CA265_RS20535	0.73	-1.2
5,082,319	-		CA265_RS20535	0.74	+1.1
5,082,354	+		CA265_RS20535	0.82	-0.6