Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20465

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
5,060,499	-				+0.1
5,060,501	+		CA265_RS20460	0.34	+0.7
5,060,507	-		CA265_RS20460	0.34	-0.2
5,060,621	+		CA265_RS20460	0.45	-1.0
5,060,624	+		CA265_RS20460	0.45	+0.2
5,060,624	+		CA265_RS20460	0.45	-1.9
5,060,625	-		CA265_RS20460	0.45	-0.8
5,060,625	-		CA265_RS20460	0.45	-0.2
5,060,626	+		CA265_RS20460	0.45	+0.2
5,060,709	+		CA265_RS20460	0.53	+0.7
5,060,710	-		CA265_RS20460	0.53	-0.9
5,060,710	-		CA265_RS20460	0.53	+0.6
5,060,739	+		CA265_RS20460	0.56	+1.3
5,060,740	-		CA265_RS20460	0.56	-0.9
5,060,746	+		CA265_RS20460	0.56	+0.6
5,060,750	+		CA265_RS20460	0.57	-0.7
5,060,750	+		CA265_RS20460	0.57	+0.1
5,060,805	-		CA265_RS20460	0.62	+0.2
5,060,805	-		CA265_RS20460	0.62	-0.6
5,060,873	-		CA265_RS20460	0.68	-1.5
5,060,886	+		CA265_RS20460	0.69	-1.7
5,060,974	+		CA265_RS20460	0.77	-0.8
5,060,979	-		CA265_RS20460	0.78	+0.1
5,061,045	+		CA265_RS20460	0.84	-0.5
5,061,046	-		CA265_RS20460	0.84	-0.7
5,061,046	-		CA265_RS20460	0.84	-0.2
5,061,070	+		CA265_RS20460	0.86	-0.7
5,061,075	-		CA265_RS20460	0.86	-0.1
5,061,099	+		CA265_RS20460	0.88	-0.5
5,061,099	+		CA265_RS20460	0.88	-1.3
5,061,100	-		CA265_RS20460	0.89	+1.4
5,061,160	-				+0.1
5,061,229	-				-2.0
5,061,238	-				-0.5
5,061,302	+				-0.9
5,061,406	-				+0.1
5,061,406	-				+0.2
5,061,426	+				+0.6
5,061,426	+				-1.6
5,061,482	-				-0.2
5,061,556	+		CA265_RS20465	0.43	-1.5
5,061,556	+		CA265_RS20465	0.43	-0.6
5,061,559	+		CA265_RS20465	0.45	+0.5
5,061,696	-				+0.2
5,061,696	-				-0.4
5,061,700	+				-0.5
5,061,701	-				+0.2
5,061,711	+				+0.2
5,061,723	+				-2.0
5,061,768	+				+0.8
5,061,769	-				+0.1
5,061,769	-				+0.5
5,061,819	+				-1.1
5,061,879	+				+1.3
5,061,879	+				-0.7
5,061,880	-				+0.0
5,061,940	+				+0.3
5,061,940	+				+0.3
5,061,953	+				-0.4
5,061,953	+				-0.7
5,061,972	-		CA265_RS20470	0.10	-1.8
5,062,151	+		CA265_RS20470	0.16	+0.1
5,062,151	+		CA265_RS20470	0.16	+0.6
5,062,152	-		CA265_RS20470	0.16	-0.9
5,062,152	-		CA265_RS20470	0.16	-0.1
5,062,153	+		CA265_RS20470	0.16	-0.1
5,062,154	-		CA265_RS20470	0.16	-0.5
5,062,274	+		CA265_RS20470	0.21	+0.5
5,062,274	+		CA265_RS20470	0.21	+0.5
5,062,290	-		CA265_RS20470	0.21	+0.2
5,062,304	+		CA265_RS20470	0.22	-0.8
5,062,304	+		CA265_RS20470	0.22	-1.0
5,062,324	+		CA265_RS20470	0.22	+0.1
5,062,330	-		CA265_RS20470	0.22	+0.1
5,062,342	-		CA265_RS20470	0.23	-0.6
5,062,603	-		CA265_RS20470	0.32	-0.5
5,062,636	-		CA265_RS20470	0.33	-0.1
5,062,638	-		CA265_RS20470	0.33	+0.5