Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20140

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,978,976	-		CA265_RS20135	0.26	-0.2
4,978,992	-		CA265_RS20135	0.28	+1.1
4,978,997	+		CA265_RS20135	0.28	+0.2
4,978,998	-		CA265_RS20135	0.28	+0.5
4,979,021	+		CA265_RS20135	0.30	-1.0
4,979,021	+		CA265_RS20135	0.30	+2.4
4,979,022	-		CA265_RS20135	0.30	-0.9
4,979,022	-		CA265_RS20135	0.30	+1.1
4,979,022	-		CA265_RS20135	0.30	+0.3
4,979,054	+		CA265_RS20135	0.32	-1.2
4,979,094	-		CA265_RS20135	0.36	+0.4
4,979,094	-		CA265_RS20135	0.36	-0.0
4,979,165	+		CA265_RS20135	0.41	+0.6
4,979,168	-		CA265_RS20135	0.42	-0.5
4,979,168	-		CA265_RS20135	0.42	+0.6
4,979,168	-		CA265_RS20135	0.42	+0.6
4,979,197	+		CA265_RS20135	0.44	+0.9
4,979,209	+		CA265_RS20135	0.45	+0.4
4,979,210	-		CA265_RS20135	0.45	+0.0
4,979,253	-		CA265_RS20135	0.48	+0.4
4,979,253	-		CA265_RS20135	0.48	-0.1
4,979,257	+		CA265_RS20135	0.49	-0.7
4,979,257	+		CA265_RS20135	0.49	+0.2
4,979,280	-		CA265_RS20135	0.50	-0.1
4,979,312	+		CA265_RS20135	0.53	+1.7
4,979,332	+		CA265_RS20135	0.55	+0.9
4,979,332	+		CA265_RS20135	0.55	+0.2
4,979,333	-		CA265_RS20135	0.55	+0.1
4,979,486	-		CA265_RS20135	0.67	-0.4
4,979,600	+		CA265_RS20135	0.76	+0.1
4,979,605	-		CA265_RS20135	0.76	+0.5
4,979,605	-		CA265_RS20135	0.76	+0.1
4,979,629	-		CA265_RS20135	0.78	+0.8
4,979,671	+		CA265_RS20135	0.82	+0.3
4,979,671	+		CA265_RS20135	0.82	-0.3
4,979,671	+		CA265_RS20135	0.82	-0.1
4,979,707	+		CA265_RS20135	0.85	-0.3
4,979,708	-		CA265_RS20135	0.85	-0.0
4,979,727	-		CA265_RS20135	0.86	-0.2
4,979,760	+		CA265_RS20135	0.89	+1.3
4,979,761	-		CA265_RS20135	0.89	-0.3
4,979,770	+		CA265_RS20135	0.90	-0.3
4,979,834	-				-0.5
4,979,867	+				+0.6
4,979,867	+				+0.4
4,979,956	-				-1.6
4,979,977	+				-0.7
4,979,978	-				-0.1
4,980,048	-		CA265_RS20140	0.23	-0.5
4,980,110	+		CA265_RS20140	0.42	-0.9
4,980,111	-		CA265_RS20140	0.42	-1.2
4,980,114	+		CA265_RS20140	0.43	-0.0
4,980,115	-		CA265_RS20140	0.43	-0.6
4,980,265	-				+4.1
4,980,345	-				-0.2
4,980,353	-				+0.6
4,980,383	-				-2.1
4,980,448	+				+0.2
4,980,479	-				-0.1
4,980,550	+		CA265_RS20145	0.11	+0.7
4,980,550	+		CA265_RS20145	0.11	-0.3
4,980,554	+		CA265_RS20145	0.11	-0.1
4,980,571	-		CA265_RS20145	0.13	+0.1
4,980,606	+		CA265_RS20145	0.17	-0.8
4,980,637	-		CA265_RS20145	0.21	-0.5
4,980,655	+		CA265_RS20145	0.23	-0.2
4,980,697	-		CA265_RS20145	0.28	-0.4
4,980,726	+		CA265_RS20145	0.31	+2.1
4,980,764	+		CA265_RS20145	0.35	-0.1
4,980,764	+		CA265_RS20145	0.35	-0.5
4,980,776	-		CA265_RS20145	0.37	+0.4
4,980,810	+		CA265_RS20145	0.41	-0.4
4,980,829	+		CA265_RS20145	0.43	+0.5
4,980,829	+		CA265_RS20145	0.43	+0.9
4,980,864	-		CA265_RS20145	0.47	+0.4
4,980,913	-		CA265_RS20145	0.53	-0.1
4,980,942	+		CA265_RS20145	0.56	-0.7
4,980,960	-		CA265_RS20145	0.58	-0.7
4,980,960	-		CA265_RS20145	0.58	-1.4
4,981,164	+		CA265_RS20145	0.82	-1.5
4,981,164	+		CA265_RS20145	0.82	+0.5
4,981,200	-		CA265_RS20145	0.86	-0.2
4,981,268	+				-0.6