Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19310

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,793,003	+		CA265_RS19305	0.31	-2.5
4,793,010	-		CA265_RS19305	0.32	-1.6
4,793,028	+		CA265_RS19305	0.33	-0.8
4,793,029	-		CA265_RS19305	0.33	+0.3
4,793,031	+		CA265_RS19305	0.33	-1.6
4,793,085	+		CA265_RS19305	0.37	-1.3
4,793,093	+		CA265_RS19305	0.38	-1.9
4,793,175	+		CA265_RS19305	0.44	-1.8
4,793,176	-		CA265_RS19305	0.45	-0.9
4,793,176	-		CA265_RS19305	0.45	-0.7
4,793,275	-		CA265_RS19305	0.52	-1.4
4,793,318	-		CA265_RS19305	0.56	-0.2
4,793,373	+		CA265_RS19305	0.60	-1.7
4,793,435	-		CA265_RS19305	0.65	-0.7
4,793,511	+		CA265_RS19305	0.71	-1.2
4,793,511	+		CA265_RS19305	0.71	-1.3
4,793,512	-		CA265_RS19305	0.71	-1.0
4,793,512	-		CA265_RS19305	0.71	-1.2
4,793,534	+		CA265_RS19305	0.73	-2.9
4,793,635	-		CA265_RS19305	0.81	-1.9
4,793,636	+		CA265_RS19305	0.81	-1.8
4,793,637	-		CA265_RS19305	0.81	-3.7
4,793,639	-		CA265_RS19305	0.81	-2.5
4,793,639	-		CA265_RS19305	0.81	-0.3
4,793,640	+		CA265_RS19305	0.81	-1.2
4,793,645	+		CA265_RS19305	0.81	-1.7
4,793,688	+		CA265_RS19305	0.85	-2.2
4,793,690	+		CA265_RS19305	0.85	-1.2
4,793,724	+		CA265_RS19305	0.88	-1.9
4,793,798	+				-0.7
4,793,871	-				+0.0
4,793,897	+				+0.1
4,793,911	+				-2.2
4,793,911	+				-2.1
4,793,922	-				-0.2
4,793,951	+				-1.6
4,793,958	-				-0.5
4,793,984	-				+1.8
4,793,984	-				+0.2
4,794,028	+				-0.6
4,794,075	-				-2.7
4,794,113	+				-2.5
4,794,168	+				-2.5
4,794,168	+				-0.9
4,794,168	+				-0.6
4,794,186	+				-0.7
4,794,217	+		CA265_RS19310	0.10	-2.7
4,794,245	-		CA265_RS19310	0.11	-0.2
4,794,373	+		CA265_RS19310	0.17	-1.5
4,794,377	+		CA265_RS19310	0.17	-2.6
4,794,506	+		CA265_RS19310	0.23	-0.8
4,794,517	+		CA265_RS19310	0.23	+0.5
4,794,547	+		CA265_RS19310	0.24	+1.3
4,794,547	+		CA265_RS19310	0.24	-2.0
4,794,682	+		CA265_RS19310	0.30	+0.0
4,794,760	+		CA265_RS19310	0.33	-2.2
4,794,910	+		CA265_RS19310	0.40	-0.8
4,795,002	+		CA265_RS19310	0.44	-1.0
4,795,083	-		CA265_RS19310	0.47	-2.0
4,795,121	-		CA265_RS19310	0.49	-0.6
4,795,224	+		CA265_RS19310	0.53	-1.3
4,795,300	+		CA265_RS19310	0.56	-1.0
4,795,311	+		CA265_RS19310	0.57	-3.2
4,795,414	+		CA265_RS19310	0.61	-0.3
4,795,449	-		CA265_RS19310	0.63	-0.4
4,795,581	-		CA265_RS19310	0.68	-1.0
4,795,600	+		CA265_RS19310	0.69	-0.7
4,795,633	+		CA265_RS19310	0.71	-3.2
4,795,638	-		CA265_RS19310	0.71	-0.8
4,795,645	+		CA265_RS19310	0.71	-0.3
4,795,645	+		CA265_RS19310	0.71	-0.6
4,795,649	-		CA265_RS19310	0.71	-1.7
4,795,711	+		CA265_RS19310	0.74	-2.0
4,795,716	+		CA265_RS19310	0.74	-1.3
4,795,726	+		CA265_RS19310	0.75	-1.3
4,795,766	+		CA265_RS19310	0.76	-2.7
4,795,786	+		CA265_RS19310	0.77	-3.2
4,795,862	+		CA265_RS19310	0.80	-2.4
4,795,889	-		CA265_RS19310	0.82	-0.9
4,795,967	+		CA265_RS19310	0.85	-0.9
4,795,967	+		CA265_RS19310	0.85	-1.0
4,795,967	+		CA265_RS19310	0.85	-1.6
4,796,053	+		CA265_RS19310	0.89	-1.1
4,796,168	-				-0.8
4,796,169	+				-1.7
4,796,179	-				+0.2
4,796,181	-				+0.4
4,796,183	-				-0.6
4,796,238	-				-0.6
4,796,314	+				-2.4
4,796,315	-				-1.6
4,796,335	-				+0.5
4,796,435	-		CA265_RS19315	0.13	+1.7
4,796,448	+		CA265_RS19315	0.14	-0.3
4,796,452	+		CA265_RS19315	0.15	-3.3
4,796,506	+		CA265_RS19315	0.21	-3.0
4,796,642	-		CA265_RS19315	0.38	-1.2
4,796,683	+		CA265_RS19315	0.43	-2.1
4,796,705	+		CA265_RS19315	0.46	-1.6
4,796,706	-		CA265_RS19315	0.46	-1.1
4,796,706	-		CA265_RS19315	0.46	-1.5
4,796,763	+		CA265_RS19315	0.53	-0.8
4,796,767	+		CA265_RS19315	0.54	-2.7
4,796,855	+		CA265_RS19315	0.65	-2.1
4,796,869	+		CA265_RS19315	0.66	-0.6
4,796,884	+		CA265_RS19315	0.68	-2.0
4,796,947	+		CA265_RS19315	0.76	-3.0
4,797,016	+		CA265_RS19315	0.85	-1.2
4,797,016	+		CA265_RS19315	0.85	-2.5
4,797,052	+		CA265_RS19315	0.89	-1.9
4,797,124	+				-1.5
4,797,133	+				-1.6
4,797,145	+				-1.9
4,797,146	-				-0.3
4,797,146	-				-0.5
4,797,159	+				-1.7
4,797,167	+				-0.1
4,797,168	-				-0.7
4,797,168	-				+0.2
4,797,200	-				+0.0
4,797,213	-				+0.1
4,797,213	-				-1.5
4,797,242	+				-0.4
4,797,242	+				-3.0
4,797,243	-				-0.1
4,797,247	+				-0.8
4,797,247	+				-1.1
4,797,306	+				-0.5