Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19305

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,791,610	+		CA265_RS19300	0.17	-2.6
4,791,715	-		CA265_RS19300	0.26	-0.8
4,791,715	-		CA265_RS19300	0.26	+0.4
4,791,724	-		CA265_RS19300	0.27	-0.4
4,791,750	+		CA265_RS19300	0.29	-0.6
4,791,833	-		CA265_RS19300	0.36	-0.3
4,791,868	+		CA265_RS19300	0.39	-1.1
4,791,876	+		CA265_RS19300	0.40	-0.3
4,792,005	+		CA265_RS19300	0.50	-1.2
4,792,011	+		CA265_RS19300	0.51	-1.3
4,792,050	+		CA265_RS19300	0.54	-1.3
4,792,053	+		CA265_RS19300	0.54	-2.6
4,792,054	-		CA265_RS19300	0.55	+0.3
4,792,069	-		CA265_RS19300	0.56	-0.2
4,792,090	+		CA265_RS19300	0.57	-0.2
4,792,156	-		CA265_RS19300	0.63	-0.0
4,792,156	-				+1.0
4,792,156	-		CA265_RS19300	0.63	-0.0
4,792,184	-		CA265_RS19300	0.65	-1.5
4,792,213	-		CA265_RS19300	0.68	-0.5
4,792,291	+		CA265_RS19300	0.74	-1.8
4,792,332	+		CA265_RS19300	0.78	-0.0
4,792,371	+		CA265_RS19300	0.81	-0.8
4,792,428	+		CA265_RS19300	0.86	-0.5
4,792,434	+		CA265_RS19300	0.86	-2.2
4,792,438	+		CA265_RS19300	0.86	-2.3
4,792,438	+		CA265_RS19300	0.86	-2.1
4,792,438	+		CA265_RS19300	0.86	-2.5
4,792,438	+		CA265_RS19300	0.86	-1.5
4,792,439	-		CA265_RS19300	0.87	-1.0
4,792,546	+				-1.8
4,792,584	-				-0.7
4,792,649	+				-0.3
4,792,780	+		CA265_RS19305	0.13	-0.7
4,792,780	+		CA265_RS19305	0.13	-1.4
4,792,780	+		CA265_RS19305	0.13	-0.1
4,792,781	-		CA265_RS19305	0.14	-1.6
4,792,858	+		CA265_RS19305	0.20	+0.1
4,792,910	+		CA265_RS19305	0.24	-0.6
4,792,920	+		CA265_RS19305	0.24	-2.1
4,792,940	+		CA265_RS19305	0.26	-0.6
4,792,959	+		CA265_RS19305	0.28	+0.0
4,792,966	-		CA265_RS19305	0.28	-1.8
4,793,003	+		CA265_RS19305	0.31	-2.5
4,793,010	-		CA265_RS19305	0.32	-1.6
4,793,028	+		CA265_RS19305	0.33	-0.8
4,793,029	-		CA265_RS19305	0.33	+0.3
4,793,031	+		CA265_RS19305	0.33	-1.6
4,793,085	+		CA265_RS19305	0.37	-1.3
4,793,093	+		CA265_RS19305	0.38	-1.9
4,793,175	+		CA265_RS19305	0.44	-1.8
4,793,176	-		CA265_RS19305	0.45	-0.9
4,793,176	-		CA265_RS19305	0.45	-0.7
4,793,275	-		CA265_RS19305	0.52	-1.4
4,793,318	-		CA265_RS19305	0.56	-0.2
4,793,373	+		CA265_RS19305	0.60	-1.7
4,793,435	-		CA265_RS19305	0.65	-0.7
4,793,511	+		CA265_RS19305	0.71	-1.2
4,793,511	+		CA265_RS19305	0.71	-1.3
4,793,512	-		CA265_RS19305	0.71	-1.0
4,793,512	-		CA265_RS19305	0.71	-1.2
4,793,534	+		CA265_RS19305	0.73	-2.9
4,793,635	-		CA265_RS19305	0.81	-1.9
4,793,636	+		CA265_RS19305	0.81	-1.8
4,793,637	-		CA265_RS19305	0.81	-3.7
4,793,639	-		CA265_RS19305	0.81	-2.5
4,793,639	-		CA265_RS19305	0.81	-0.3
4,793,640	+		CA265_RS19305	0.81	-1.2
4,793,645	+		CA265_RS19305	0.81	-1.7
4,793,688	+		CA265_RS19305	0.85	-2.2
4,793,690	+		CA265_RS19305	0.85	-1.2
4,793,724	+		CA265_RS19305	0.88	-1.9
4,793,798	+				-0.7
4,793,871	-				+0.0
4,793,897	+				+0.1
4,793,911	+				-2.2
4,793,911	+				-2.1
4,793,922	-				-0.2
4,793,951	+				-1.6
4,793,958	-				-0.5
4,793,984	-				+1.8
4,793,984	-				+0.2
4,794,028	+				-0.6
4,794,075	-				-2.7
4,794,113	+				-2.5
4,794,168	+				-2.5
4,794,168	+				-0.9
4,794,168	+				-0.6
4,794,186	+				-0.7
4,794,217	+		CA265_RS19310	0.10	-2.7
4,794,245	-		CA265_RS19310	0.11	-0.2
4,794,373	+		CA265_RS19310	0.17	-1.5
4,794,377	+		CA265_RS19310	0.17	-2.6
4,794,506	+		CA265_RS19310	0.23	-0.8
4,794,517	+		CA265_RS19310	0.23	+0.5
4,794,547	+		CA265_RS19310	0.24	+1.3
4,794,547	+		CA265_RS19310	0.24	-2.0
4,794,682	+		CA265_RS19310	0.30	+0.0
4,794,760	+		CA265_RS19310	0.33	-2.2