Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19270

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,784,640	+		CA265_RS19260	0.58	-1.2
4,784,712	-		CA265_RS19260	0.67	-0.5
4,784,764	-		CA265_RS19260	0.74	-0.3
4,784,765	+		CA265_RS19260	0.74	-1.0
4,784,766	-		CA265_RS19260	0.74	-1.7
4,784,879	-		CA265_RS19260	0.89	-1.2
4,784,945	+				-1.9
4,784,968	-				+0.1
4,785,150	+		CA265_RS19265	0.30	-0.8
4,785,175	-		CA265_RS19265	0.34	-2.2
4,785,188	+		CA265_RS19265	0.36	-0.0
4,785,189	-		CA265_RS19265	0.36	-1.2
4,785,373	-		CA265_RS19265	0.66	-0.3
4,785,450	+		CA265_RS19265	0.78	+0.3
4,785,524	+		CA265_RS19265	0.90	-1.5
4,785,568	+				-3.0
4,785,571	-				-0.4
4,785,613	+				-1.3
4,785,684	+				-0.3
4,785,722	+		CA265_RS19270	0.10	-1.3
4,785,749	+		CA265_RS19270	0.13	-2.2
4,785,814	-		CA265_RS19270	0.19	-2.2
4,785,849	-		CA265_RS19270	0.22	-2.2
4,786,014	+		CA265_RS19270	0.38	+0.2
4,786,020	+		CA265_RS19270	0.38	-1.7
4,786,021	-		CA265_RS19270	0.38	-1.8
4,786,083	-		CA265_RS19270	0.44	-1.0
4,786,083	-		CA265_RS19270	0.44	-0.3
4,786,087	-		CA265_RS19270	0.45	-0.0
4,786,090	-		CA265_RS19270	0.45	-1.7
4,786,164	+		CA265_RS19270	0.52	-0.9
4,786,165	-		CA265_RS19270	0.52	-0.8
4,786,187	+		CA265_RS19270	0.54	-1.6
4,786,217	+		CA265_RS19270	0.57	-3.1
4,786,218	-		CA265_RS19270	0.57	-0.8
4,786,298	+		CA265_RS19270	0.64	-0.6
4,786,314	+		CA265_RS19270	0.66	-1.9
4,786,344	-		CA265_RS19270	0.69	-1.2
4,786,347	+		CA265_RS19270	0.69	-1.3
4,786,348	-		CA265_RS19270	0.69	-0.8
4,786,389	-		CA265_RS19270	0.73	-1.8
4,786,396	+		CA265_RS19270	0.74	-1.7
4,786,450	-		CA265_RS19270	0.79	-0.8
4,786,458	-		CA265_RS19270	0.79	+2.0
4,786,458	-		CA265_RS19270	0.79	-1.1
4,786,518	-		CA265_RS19270	0.85	-2.3
4,786,522	-		CA265_RS19270	0.85	+1.0
4,786,550	+		CA265_RS19270	0.88	+0.7
4,786,551	-		CA265_RS19270	0.88	-1.0
4,786,551	-		CA265_RS19270	0.88	-2.1
4,786,600	-				-0.0
4,786,611	+				-2.2
4,786,677	-				-0.9
4,786,726	+				-1.5
4,786,785	+		CA265_RS19275	0.11	-0.6
4,787,032	+		CA265_RS19275	0.50	-0.6
4,787,080	+		CA265_RS19275	0.58	-0.9
4,787,106	+		CA265_RS19275	0.62	-1.3
4,787,321	+				-2.2
4,787,322	-				-0.0
4,787,344	+				-0.8
4,787,346	+				-1.4
4,787,542	+		CA265_RS19280	0.16	-0.3