Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19255

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,782,071	-		CA265_RS19250	0.18	-0.2
4,782,071	-		CA265_RS19250	0.18	-0.8
4,782,071	-		CA265_RS19250	0.18	-2.1
4,782,071	-		CA265_RS19250	0.18	-3.5
4,782,163	-		CA265_RS19250	0.26	+0.4
4,782,176	+		CA265_RS19250	0.27	-1.3
4,782,191	+		CA265_RS19250	0.28	-0.0
4,782,195	-		CA265_RS19250	0.29	-2.6
4,782,289	+		CA265_RS19250	0.36	-0.7
4,782,289	+		CA265_RS19250	0.36	-1.7
4,782,291	+		CA265_RS19250	0.36	-0.7
4,782,291	+		CA265_RS19250	0.36	-1.7
4,782,292	-		CA265_RS19250	0.37	-1.3
4,782,338	+		CA265_RS19250	0.40	-0.2
4,782,338	+		CA265_RS19250	0.40	-0.2
4,782,383	+		CA265_RS19250	0.44	+0.2
4,782,383	+		CA265_RS19250	0.44	-2.0
4,782,428	+		CA265_RS19250	0.48	+1.0
4,782,429	-		CA265_RS19250	0.48	-1.0
4,782,463	-		CA265_RS19250	0.51	-1.7
4,782,602	-		CA265_RS19250	0.62	-1.7
4,782,663	-				+1.4
4,782,668	-		CA265_RS19250	0.67	-2.4
4,782,670	-		CA265_RS19250	0.68	-1.0
4,782,777	+		CA265_RS19250	0.76	-1.8
4,782,777	+		CA265_RS19250	0.76	-2.4
4,782,866	-		CA265_RS19250	0.84	-0.9
4,782,868	+		CA265_RS19250	0.84	-1.1
4,782,980	+				-0.0
4,782,991	+				-1.3
4,783,049	-				-2.6
4,783,070	-				-2.2
4,783,070	-				-0.1
4,783,094	-				-0.2
4,783,130	-				-0.0
4,783,159	+				-0.0
4,783,397	-		CA265_RS19255	0.29	+1.0
4,783,423	+		CA265_RS19255	0.32	-1.8
4,783,484	+		CA265_RS19255	0.37	-2.0
4,783,516	+		CA265_RS19255	0.40	-0.2
4,783,516	+		CA265_RS19255	0.40	-1.8
4,783,658	+		CA265_RS19255	0.52	-1.5
4,783,821	-		CA265_RS19255	0.67	-1.0
4,783,948	+		CA265_RS19255	0.78	+0.4
4,783,956	-		CA265_RS19255	0.79	-1.3
4,784,112	+				-1.6
4,784,112	+				-0.0
4,784,130	+				+0.4
4,784,172	+				-2.0
4,784,221	-				-0.1
4,784,230	+				-0.0
4,784,240	-				-1.0
4,784,240	-				+1.0
4,784,398	-		CA265_RS19260	0.26	-1.6
4,784,421	+		CA265_RS19260	0.29	-1.0
4,784,427	-		CA265_RS19260	0.30	-2.1
4,784,427	-		CA265_RS19260	0.30	-0.5
4,784,544	-		CA265_RS19260	0.45	-0.5
4,784,575	-		CA265_RS19260	0.49	-0.0
4,784,640	+		CA265_RS19260	0.58	-1.2
4,784,712	-		CA265_RS19260	0.67	-0.5
4,784,764	-		CA265_RS19260	0.74	-0.3
4,784,765	+		CA265_RS19260	0.74	-1.0
4,784,766	-		CA265_RS19260	0.74	-1.7
4,784,879	-		CA265_RS19260	0.89	-1.2
4,784,945	+				-1.9
4,784,968	-				+0.1
4,785,150	+		CA265_RS19265	0.30	-0.8
4,785,175	-		CA265_RS19265	0.34	-2.2
4,785,188	+		CA265_RS19265	0.36	-0.0
4,785,189	-		CA265_RS19265	0.36	-1.2