Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19245

Experiment: R2A with A22 0.02 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.02 mg/ml
4,780,335	-		CA265_RS19235	0.42	-0.0
4,780,345	+		CA265_RS19235	0.43	-2.9
4,780,798	+				-0.8
4,780,999	+		CA265_RS19240	0.60	-3.4
4,780,999	+		CA265_RS19240	0.60	-2.3
4,781,109	+				-4.3
4,781,125	+				-2.3
4,781,164	+				+0.4
4,781,186	-				-0.5
4,781,196	+				-0.9
4,781,223	+				-1.6
4,781,242	+				-0.4
4,781,242	+				-0.9
4,781,274	+				-2.0
4,781,274	+				-0.6
4,781,274	+				-0.9
4,781,274	+				-1.5
4,781,275	-				-0.0
4,781,276	+				-0.4
4,781,276	+				-0.7
4,781,276	+				-0.9
4,781,277	-				+0.3
4,781,277	-				-0.2
4,781,311	+		CA265_RS19245	0.13	-2.1
4,781,324	+		CA265_RS19245	0.15	-0.7
4,781,325	-		CA265_RS19245	0.15	-1.1
4,781,325	-		CA265_RS19245	0.15	-1.8
4,781,393	+		CA265_RS19245	0.26	-1.4
4,781,426	-		CA265_RS19245	0.32	-0.7
4,781,495	+		CA265_RS19245	0.44	-0.7
4,781,496	-		CA265_RS19245	0.44	-0.6
4,781,496	-		CA265_RS19245	0.44	-1.0
4,781,533	+		CA265_RS19245	0.50	-0.2
4,781,533	+		CA265_RS19245	0.50	+3.0
4,781,534	-		CA265_RS19245	0.50	-0.1
4,781,537	+		CA265_RS19245	0.51	-1.5
4,781,538	-		CA265_RS19245	0.51	-1.2
4,781,538	-		CA265_RS19245	0.51	+0.4
4,781,550	-		CA265_RS19245	0.53	-0.5
4,781,607	-		CA265_RS19245	0.63	+0.6
4,781,619	-		CA265_RS19245	0.65	+0.6
4,781,628	-		CA265_RS19245	0.66	-0.3
4,781,638	+		CA265_RS19245	0.68	-0.4
4,781,639	-		CA265_RS19245	0.68	-1.1
4,781,643	+		CA265_RS19245	0.69	-1.1
4,781,649	+		CA265_RS19245	0.70	-0.0
4,781,649	+		CA265_RS19245	0.70	-0.3
4,781,649	+		CA265_RS19245	0.70	-0.7
4,781,650	-		CA265_RS19245	0.70	-1.7
4,781,650	-		CA265_RS19245	0.70	-0.6
4,781,693	+		CA265_RS19245	0.77	-0.0
4,781,693	+		CA265_RS19245	0.77	-1.1
4,781,694	-		CA265_RS19245	0.77	-1.4
4,781,696	-		CA265_RS19245	0.78	-2.7
4,781,721	+		CA265_RS19245	0.82	-1.0
4,781,725	+		CA265_RS19245	0.83	-1.4
4,781,819	-				-1.6
4,781,827	+				-0.7
4,781,828	-				-0.4
4,781,836	-				+0.2
4,781,912	+				+1.0
4,782,019	+		CA265_RS19250	0.14	+1.0
4,782,071	-		CA265_RS19250	0.18	-0.2
4,782,071	-		CA265_RS19250	0.18	-0.8
4,782,071	-		CA265_RS19250	0.18	-2.1
4,782,071	-		CA265_RS19250	0.18	-3.5
4,782,163	-		CA265_RS19250	0.26	+0.4
4,782,176	+		CA265_RS19250	0.27	-1.3
4,782,191	+		CA265_RS19250	0.28	-0.0
4,782,195	-		CA265_RS19250	0.29	-2.6
4,782,289	+		CA265_RS19250	0.36	-0.7
4,782,289	+		CA265_RS19250	0.36	-1.7
4,782,291	+		CA265_RS19250	0.36	-0.7
4,782,291	+		CA265_RS19250	0.36	-1.7
4,782,292	-		CA265_RS19250	0.37	-1.3
4,782,338	+		CA265_RS19250	0.40	-0.2
4,782,338	+		CA265_RS19250	0.40	-0.2
4,782,383	+		CA265_RS19250	0.44	+0.2
4,782,383	+		CA265_RS19250	0.44	-2.0
4,782,428	+		CA265_RS19250	0.48	+1.0
4,782,429	-		CA265_RS19250	0.48	-1.0
4,782,463	-		CA265_RS19250	0.51	-1.7
4,782,602	-		CA265_RS19250	0.62	-1.7
4,782,663	-				+1.4
4,782,668	-		CA265_RS19250	0.67	-2.4
4,782,670	-		CA265_RS19250	0.68	-1.0
4,782,777	+		CA265_RS19250	0.76	-1.8
4,782,777	+		CA265_RS19250	0.76	-2.4